RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PACS2Q86VP3 889 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 LRRC6Q86X45 466 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MREGQ8N565 214 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RDM1Q8NG50 284 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 AGR3Q8TD06 166 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 UBE2E3Q969T4 207 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PCDHB12Q9Y5F1 795 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PDCD5O14737 125 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PLA2G4BP0C869 781 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ODC1P11926 461 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PPP2R2AP63151 447 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 C2orf54Q08AI8 447 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF790Q6PG37 636 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KCTD1Q719H9 257 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MPP5Q8N3R9 675 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC33Q8N5R6 958 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MED8Q96G25 268 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GPR101Q96P66 508 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SLC38A2Q96QD8 506 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PCIF1Q9H4Z3 704 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ANKZF1Q9H8Y5 726 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 AHCTF1Q8WYP5 2266 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 DCDC2CA8MYV0 355 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 SLC28A1O00337 649 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 TPD52L2O43399 206 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PIP5K1CO60331 668 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 RSL1D1O76021 490 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 IL18RAPO95256 599 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 GDF11O95390 407 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CRTAMO95727 393 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ENO1P06733 434 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 LCP1P13796 627 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CYP2A7P20853 494 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 RGS7P49802 495 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF177Q13360 481 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 LRRC36Q1X8D7 754 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 SLC25A25Q6KCM7 469 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 SLC44A2Q8IWA5 706 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 DCAF4Q8WV16 495 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 TTLL2Q9BWV7 592 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 SMURF2Q9HAU4 748 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 LMBRD1Q9NUN5 540 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 GMIPQ9P107 970 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 E7EWF7 191 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 RAD17O75943 681 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 OGNP20774 298 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 POU1F1P28069 291 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 THOP1P52888 689 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 MRPS25P82663 173 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 EIF4A2Q14240 407 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 IFNL1Q8IU54 200 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 NSUN6Q8TEA1 469 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 TRPC4APQ8TEL6 797 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 OTUB2Q96DC9 234 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 YME1L1Q96TA2 773 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 GOLPH3Q9H4A6 298 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 MTMR4Q9NYA4 1195 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 hCG_1642624A0A1W2PR95 340 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 C5orf51A6NDU8 294 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 TAF5LO75529 589 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 BBOX1O75936 387 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ASS1P00966 412 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 IFNA6P05013 189 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 MSL3P1P0C860 447 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CTSEP14091 401 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ADORA2BP29275 332 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 GFPT1Q06210 699 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 USP10Q14694 798 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ALG10Q5BKT4 473 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 NAPEPLDQ6IQ20 393 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 RNF44Q7L0R7 432 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 SLC4A11Q8NBS3 891 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 NSUN7Q8NE18 718 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PNKPQ96T60 521 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 C6orf62Q9GZU0 229 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PRDM8Q9NQV8 689 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC59Q9P031 241 aaKnown RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ANKRD6Q9Y2G4 727 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 IFT52Q9Y366 437 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 MFHAS1Q9Y4C4 1052 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 NPATQ14207 1427 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 FAM47DPA6NHR8 397 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PCDH8O95206 1070 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ANXA5P08758 320 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 CXCR5P32302 372 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 OMPP47874 163 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 DGKDQ16760 1214 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 GALNTL6Q49A17 601 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 LACTB2Q53H82 288 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-212ENST00000636194 STRIP1Q5VSL9 837 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 PARP9Q8IXQ6 854 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 KLHL23Q8NBE8 558 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 NEDD1Q8NHV4 660 aa6.17□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF564Q8TBZ8 553 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms