RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 VSTM1Q6UX27 236 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 RNF19BQ6ZMZ0 732 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 C16orf59Q7L2K0 433 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 CMTR2Q8IYT2 770 aaKnown RBP10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 SLC39A11Q8N1S5 342 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 SLC7A14Q8TBB6 771 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 FAM71BQ8TC56 605 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 CCDC114Q96M63 670 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 MTMR10Q9NXD2 777 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 SAE1Q9UBE0 346 aaPredicted RBP10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 MTRRQ9UBK8 725 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 FAM153AQ9UHL3 310 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 DNPEPQ9ULA0 475 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 CDY1Q9Y6F8 540 aa10.41□□□□□ -0.74
CACNA1A-216ENST00000635742 GREB1Q4ZG55 1949 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 BAIAP3O94812 1187 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 PECAM1P16284 738 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 CAPN2P17655 700 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 MAGEA11P43364 429 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 TNNT3P45378 269 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 OTUD4Q01804 1114 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 DEUP1Q05D60 604 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 NME3Q13232 169 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 GPR17Q13304 367 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 CUL1Q13616 776 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 PDK2Q15119 407 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 TRIP13Q15645 432 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 PSMD5Q16401 504 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 DPYSL2Q16555 572 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 BSPRYQ5W0U4 402 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 PYROXD2Q8N2H3 581 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 PQLC3Q8N755 202 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 COLGALT1Q8NBJ5 622 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 ACTL9Q8TC94 416 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 RIN2Q8WYP3 895 aaPredicted RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 BADQ92934 168 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 C8orf48Q96LL4 319 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 WDR6Q9NNW5 1121 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 GRHL1Q9NZI5 618 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 FZD10Q9ULW2 581 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 SNX24Q9Y343 169 aa10.4□□□□□ -0.74
CACNA1A-216ENST00000635742 WDR27A2RRH5 827 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ZBBXA8MT70 800 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 C2CD2LO14523 706 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 MAP2K7O14733 419 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 TRIM66O15016 1216 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 L1CAMP32004 1257 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 RPL21P46778 160 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 YWHAGP61981 247 aaKnown RBP eCLIP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 USP46P62068 366 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ROR1Q01973 937 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PTK6Q13882 451 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 CASP8Q14790 479 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PPP1R7Q15435 360 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 OASLQ15646 514 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ANKRD20A8PQ5CZ79 823 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PPP6R3Q5H9R7 873 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 EMBQ6PCB8 327 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 NPNTQ6UXI9 565 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SCD5Q86SK9 330 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PRUNE1Q86TP1 453 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 TAC4Q86UU9 113 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ATL2Q8NHH9 583 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC35B2Q8TB61 432 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 GPR152Q8TDT2 470 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 DQX1Q8TE96 717 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 FAF2Q96CS3 445 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SEPT5Q99719 369 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ZNF670Q9BS34 389 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 NMUR1Q9HB89 426 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ANLNQ9NQW6 1124 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM114A2Q9NRY5 505 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 NEU2Q9Y3R4 380 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 I6L893 689 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 APOC4-APOC2K7ER74 178 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 APOC2P02655 101 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SOD2P04179 222 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 LAG3P18627 525 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 VCPP55072 806 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 BYSLQ13895 437 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC8B1Q6J4K2 584 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ZNF365Q70YC5 407 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 MTERF4Q7Z6M4 381 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 C7orf61Q8IZ16 206 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 NUP93Q8N1F7 819 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PLD5Q8N7P1 536 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms