RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 TMEM191BP0C7N4 346 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 TRIM27P14373 513 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 MATN1P21941 496 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 JAK3P52333 1124 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 RPS13P62277 151 aaKnown RBP3.91□□□□□ -1.78
SRP54-214ENST00000630962 HTRA4P83105 476 aaPredicted RBP3.91□□□□□ -1.78
SRP54-214ENST00000630962 ZNF543Q08ER8 600 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 CLEC9AQ6UXN8 241 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 TTC30AQ86WT1 665 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 P3H2Q8IVL5 708 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 CCDC33Q8N5R6 958 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.91□□□□□ -1.78
SRP54-214ENST00000630962 BRI3BPQ8WY22 251 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 EDC3Q96F86 508 aaKnown RBP3.91□□□□□ -1.78
SRP54-214ENST00000630962 WDYHV1Q96HA8 205 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 SNX27Q96L92 541 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 ZNF778Q96MU6 729 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 EFHD1Q9BUP0 239 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 QTRT1Q9BXR0 403 aaKnown RBP3.91□□□□□ -1.78
SRP54-214ENST00000630962 ADGRE3Q9BY15 652 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 USP29Q9HBJ7 922 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 MYO1AQ9UBC5 1043 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 ANO9A1A5B4 782 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 POM121BA6NF01 834 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 KCNU1A8MYU2 1149 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 HNRNPDLO14979 420 aaKnown RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 SLC3A2P08195 630 aaKnown RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 TMIGD3P0DMS9 266 aaPredicted RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 ATP5F1P24539 256 aaPredicted RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 DUSP1P28562 367 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 CASP5P51878 434 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 GPS1Q13098 491 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 DNASE1L3Q13609 305 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 GALEQ14376 348 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 MFSD13AQ14CX5 517 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 ACOX1Q15067 660 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 GLE1Q53GS7 698 aaKnown RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 COBLL1Q53SF7 1204 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 PAPD7Q5XG87 772 aaKnown RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 SUN3Q8TAQ9 357 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 PNISRQ8TF01 805 aaKnown RBP3.9□□□□□ -1.79
SRP54-214ENST00000630962 NUDT22Q9BRQ3 303 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 VPS16Q9H269 839 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 CA14Q9ULX7 337 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 CORO2BQ9UQ03 480 aa3.9□□□□□ -1.79
SRP54-214ENST00000630962 A0A1W2PPC4 97 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 FCHO1O14526 889 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 APOL1O14791 398 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 PARNO95453 639 aaKnown RBP3.89□□□□□ -1.79
SRP54-214ENST00000630962 NBPF7P0C2Y1 421 aaPredicted RBP3.89□□□□□ -1.79
SRP54-214ENST00000630962 FGFR2P21802 821 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 ATICP31939 592 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 MCM5P33992 734 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 PIK3CBP42338 1070 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 STT3AP46977 705 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 SLC12A2P55011 1212 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 GPC5P78333 572 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 ID2Q02363 134 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 KCNJ12Q14500 433 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 KCNAB1Q14722 419 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 SUPT20HL1Q3ZLR7 823 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 UEVLDQ8IX04 471 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 C11orf44Q8N8P7 122 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 PJA1Q8NG27 643 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 C16orf52Q8NHV5 167 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 TIFAQ96CG3 184 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 COQ8BQ96D53 544 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 APOL5Q9BWW9 433 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 NUAK2Q9H093 628 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 PDGFCQ9NRA1 345 aa3.89□□□□□ -1.79
SRP54-214ENST00000630962 SIRT4Q9Y6E7 314 aaPredicted RBP3.89□□□□□ -1.79
SRP54-214ENST00000630962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 F8W8V4 182 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 SOCS2O14508 198 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 TOP3BO95985 862 aaKnown RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 KRT18P05783 430 aaKnown RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 ARHGAP25P42331 645 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ATP1A4Q13733 1029 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ETFDHQ16134 617 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 CNGA3Q16281 694 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 SLC5A9Q2M3M2 681 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ARL13BQ3SXY8 428 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 SLC9C1Q4G0N8 1177 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 TMTC4Q5T4D3 741 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ARL6IP4Q66PJ3 421 aaKnown RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 METTL25Q8N6Q8 603 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 NANOGP1Q8N7R0 232 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 MAP4K1Q92918 833 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 P2RY11Q96G91 374 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 SIGLEC11Q96RL6 698 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 WDR24Q96S15 920 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 SENP7Q9BQF6 1050 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 TM7SF3Q9NS93 570 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ARL8BQ9NVJ2 186 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 TRNAU1APQ9NX07 287 aaKnown RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 SEMA5BQ9P283 1151 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms