RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PPP1R10Q96QC0 940 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MTMR9Q96QG7 549 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 WDR24Q96S15 920 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SEPT5Q99719 369 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NFKBIZQ9BYH8 718 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CCSER1Q9C0I3 900 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 BLZF1Q9H2G9 400 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ATXN3LQ9H3M9 355 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF334Q9HCZ1 680 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SEMA4GQ9NTN9 838 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 POLR3BQ9NW08 1133 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RMND1Q9NWS8 449 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF446Q9NWS9 450 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 C2orf42Q9NWW7 574 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CEP72Q9P209 647 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TUBGCP4Q9UGJ1 667 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 V9GYY5 206 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MIA3Q5JRA6 1907 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ASCC3Q8N3C0 2202 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MAN2B1O00754 1011 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KLRC4O43908 158 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ECI2O75521 394 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RPN1P04843 607 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MYL1P05976 194 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NPTX2P47972 431 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SMCPP49901 116 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CBX1P83916 185 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 STRN3Q13033 797 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 PON2Q15165 354 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KRT31Q15323 416 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SF3A2Q15428 464 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NFE2Q16621 373 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 C21orf62-AS1Q17RA5 79 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CDCA2Q69YH5 1023 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KLHL10Q6JEL2 608 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RAD9BQ6WBX8 426 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 DSTYKQ6XUX3 929 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ARID3BQ8IVW6 561 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 IGSF22Q8N9C0 903 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 C12orf50Q8NA57 414 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NOC3LQ8WTT2 800 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 PMM1Q92871 262 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RHOBTB2Q9BYZ6 727 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MRPL44Q9H9J2 332 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TUFT1Q9NNX1 390 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SLC38A7Q9NVC3 462 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SUSD2Q9UGT4 822 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CORINQ9Y5Q5 1042 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 FREM2Q5SZK8 3169 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SPEGQ15772 3267 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 DENND4AQ7Z401 1863 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 PRR5-ARHGAP8B1AHC4 643 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 H7C4K7 107 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 HIP1RO75146 1068 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CXCL8P10145 99 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RPA1P27694 616 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 NMT1P30419 496 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 CCR3P51677 355 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ARHGAP8P85298 464 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 YWHAHQ04917 246 aaPredicted RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 GAS6Q14393 721 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 INPP5AQ14642 412 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MTF1Q14872 753 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KARSQ15046 597 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 ERCC6LQ2NKX8 1250 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TXNDC11Q6PKC3 985 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 TTC9BQ8N6N2 239 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 RASSF8Q8NHQ8 419 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 KIFAP3Q92845 792 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 DDX23Q9BUQ8 820 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 SPATA9Q9BWV2 254 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MRPL4Q9BYD3 311 aaKnown RBP5.16□□□□□ -1.58
LINC00550-201ENST00000629293 EPC1Q9H2F5 836 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 DNM3Q9UQ16 869 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 YIPF1Q9Y548 306 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MRFAP1Q9Y605 127 aa5.16□□□□□ -1.58
LINC00550-201ENST00000629293 MTCL1Q9Y4B5 1905 aaKnown RBP5.15□□□□□ -1.58
LINC00550-201ENST00000629293 EFCAB8A8MWE9 144 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 TNFRSF10CO14798 259 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 TBC1D4O60343 1298 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 CTSBP07858 339 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 SDHBP21912 280 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 GABRR2P28476 465 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 GBP1P32455 592 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 STAT6P42226 847 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ALDH1A3P47895 512 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 COPB1P53618 953 aaKnown RBP5.15□□□□□ -1.58
LINC00550-201ENST00000629293 CYP4F8P98187 520 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 DMTNQ08495 405 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ORC2Q13416 577 aaPredicted RBP5.15□□□□□ -1.58
LINC00550-201ENST00000629293 TRIM14Q14142 442 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF528Q3MIS6 628 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 TCP11X2Q5H9J9 407 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 RRAGBQ5VZM2 374 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 FIGNL1Q6PIW4 674 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 UNC5AQ6ZN44 842 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 GPR65Q8IYL9 337 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 GPR161Q8N6U8 529 aaKnown RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms