RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 OPRD1P41143 372 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 RPS9P46781 194 aaKnown RBP11.66□□□□□ -0.54
DDX41-219ENST00000629036 PSEN1P49768 467 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 RGS7P49802 495 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
DDX41-219ENST00000629036 ZSCAN23Q3MJ62 389 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 MSANTD2Q6P1R3 559 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 RALGPS2Q86X27 583 aaPredicted RBP11.66□□□□□ -0.54
DDX41-219ENST00000629036 YAF2Q8IY57 180 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 STK32AQ8WU08 396 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 SHDQ96IW2 340 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 DNAI2Q9GZS0 605 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 C8orf33Q9H7E9 229 aaPredicted RBP11.66□□□□□ -0.54
DDX41-219ENST00000629036 CNGB3Q9NQW8 809 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 DUS2Q9NX74 493 aaKnown RBP11.66□□□□□ -0.54
DDX41-219ENST00000629036 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 SIT1Q9Y3P8 196 aa11.66□□□□□ -0.54
DDX41-219ENST00000629036 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 E2F8A0AVK6 867 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 FAM170BA6NMN3 283 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 GFRA2O00451 464 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 PIK3R2O00459 728 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 TRDMT1O14717 391 aaKnown RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 TEX33O43247 280 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 THAP12O43422 761 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 STC2O76061 302 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 CDH5P33151 784 aaPredicted RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 ZNF165P49910 485 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 YWHAGP61981 247 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX41-219ENST00000629036 PDCLQ13371 301 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 UBXN2BQ14CS0 331 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 SYCP1Q15431 976 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 ST3GAL2Q16842 350 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 FSTL4Q6MZW2 842 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 RHBDF2Q6PJF5 856 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 ZNF852Q6ZMS4 543 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 HTR3DQ70Z44 454 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 TMEM110Q86TL2 294 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 C12orf40Q86WS4 652 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 ADGRG2Q8IZP9 1017 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 PHTF2Q8N3S3 785 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 FAM3CQ92520 227 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 ATP2A3Q93084 1043 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 CPXM1Q96SM3 734 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 CHRDQ9H2X0 955 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 CBX8Q9HC52 389 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 C2orf42Q9NWW7 574 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 THG1LQ9NWX6 298 aaKnown RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
DDX41-219ENST00000629036 NOCTQ9UK39 431 aaKnown RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
DDX41-219ENST00000629036 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 E5RJQ4 531 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 MAN2B1O00754 1011 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 IGLV3-27P01718 113 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 ATP5C1P36542 298 aaKnown RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 EIF4EBP2Q13542 120 aaPredicted RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 PON2Q15165 354 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 C10orf120Q5SQS8 335 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 BSPRYQ5W0U4 402 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 Q6ZS52 159 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 NOP9Q86U38 636 aaKnown RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX41-219ENST00000629036 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 ETFBKMTQ8IXQ9 262 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 FAM217AQ8IXS0 508 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 CSGALNACT1Q8TDX6 532 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 IRGQQ8WZA9 623 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 STK33Q9BYT3 514 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 LHX5Q9H2C1 402 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 LRRC4Q9HBW1 653 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 FAM207AQ9NSI2 230 aaPredicted RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 RBM12Q9NTZ6 932 aaKnown RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 DLL3Q9NYJ7 618 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 DNMT3LQ9UJW3 386 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 NDRG2Q9UN36 371 aaKnown RBP11.64□□□□□ -0.55
DDX41-219ENST00000629036 CHD5Q8TDI0 1954 aa11.64□□□□□ -0.55
DDX41-219ENST00000629036 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 HOXC11O43248 304 aaPredicted RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 IGLV3-25P01717 112 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 IRF1P10914 325 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 LCP1P13796 627 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 CYP11B1P15538 503 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 CHRNB2P17787 502 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 PTMSP20962 102 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 HOXC13P31276 330 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 IFNAR2P48551 515 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 KPNA1P52294 538 aaPredicted RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 SLC8A3P57103 927 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 RAPGEF1Q13905 1077 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 DHCR24Q15392 516 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 TRIP4Q15650 581 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms