RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 SLC12A8A0AV02 714 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 FAM187AA6NFU0 413 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 KDM7AQ6ZMT4 941 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 KCNN1Q92952 543 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 CCDC114Q96M63 670 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRIM31Q9BZY9 425 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 DHX35Q9H5Z1 703 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TJP2Q9UDY2 1190 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 PTGIRP43119 386 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 DYNLT1P63172 113 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 ADAM32Q8TC27 787 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZNF576Q9H609 170 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 TMBIM4Q9HC24 238 aa12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-207ENST00000628646 GRM6O15303 877 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TEX28O15482 410 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TAS1R1Q7RTX1 841 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TP73O15350 636 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 CLDN10P78369 228 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 PABPC1LQ4VXU2 614 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 RFX6Q8HWS3 928 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZNF461Q8TAF7 563 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 PBX4Q9BYU1 374 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 FAM189A1O60320 539 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 GJB6O95452 261 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 GPD1P21695 349 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ATP5DP30049 168 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 SLC1A1P43005 524 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 HARS2P49590 506 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 YWHAZP63104 245 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TAP1Q03518 808 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 DSC1Q08554 894 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 ZDHHC24Q6UX98 284 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
SYNGAP1-207ENST00000628646 TAF10Q12962 218 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 KCTD16Q68DU8 428 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 LRIG3Q6UXM1 1119 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CAPS2Q9BXY5 557 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 B3GNT5Q9BYG0 378 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 RRP15Q9Y3B9 282 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CHRNA3P32297 505 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 TPGS2Q68CL5 300 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 BCO2Q9BYV7 579 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 MAN1C1Q9NR34 630 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 MYO1CO00159 1063 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 LTFP02788 710 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CYP1A2P05177 515 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 HDCP19113 662 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 DR1Q01658 176 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 GPR17Q13304 367 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 DHX34Q14147 1143 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 TCTN1Q2MV58 587 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 PRELID2Q8N945 189 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 OR10T2Q8NGX3 314 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 OR2W6PQ8NHA6 318 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 BTBD6Q96KE9 485 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 TRIM51Q9BSJ1 452 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 KIF9Q9HAQ2 790 aa12.96□□□□□ -0.33
SYNGAP1-207ENST00000628646 CTSAP10619 480 aa12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 UBAP2Q5T6F2 1119 aaKnown RBP12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 MCOLN2Q8IZK6 566 aa12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 RXFP2Q8WXD0 754 aa12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 ING5Q8WYH8 240 aa12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 NDRG1Q92597 394 aaKnown RBP12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.34
SYNGAP1-207ENST00000628646 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 BNIP3LO60238 219 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC5A3P53794 718 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 DENND2CQ68D51 928 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms