RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TJP2Q9UDY2 1190 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 DENND4CQ5VZ89 1909 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 KANSL1LA0AUZ9 987 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 C2orf78A6NCI8 922 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 YJEFN3A6XGL0 299 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 SOBPA7XYQ1 873 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 E7ENQ6 273 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 TLR5O60602 858 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 LTFP02788 710 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 PLEKP08567 350 aaPredicted RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 UNGP13051 313 aaPredicted RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 RARGP13631 454 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 PFKLP17858 780 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 MMP8P22894 467 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 AVPR1AP37288 418 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 TUBP50607 506 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 CENPCQ03188 943 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 SNX30Q5VWJ9 437 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 BTBD8Q5XKL5 378 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 MMS22LQ6ZRQ5 1243 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 FAM183BPQ6ZVS7 135 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 RSRC2Q7L4I2 434 aaKnown RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 SCD5Q86SK9 330 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 TADA2BQ86TJ2 420 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 SCUBE3Q8IX30 993 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 CMTM8Q8IZV2 173 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 TC2NQ8N9U0 490 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 DTWD2Q8NBA8 298 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 RIN3Q8TB24 985 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 C18orf8Q96DM3 657 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 SHDQ96IW2 340 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 CDK5RAP1Q96SZ6 601 aaKnown RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 PHOX2BQ99453 314 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 C11orf70Q9BRQ4 267 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 TRIM62Q9BVG3 475 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 CCSER2Q9H7U1 834 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 HEBP1Q9NRV9 189 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 CLIC5Q9NZA1 410 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 MTF2Q9Y483 593 aaPredicted RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 NUP210Q8TEM1 1887 aaPredicted RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 KIF26AQ9ULI4 1882 aaPredicted RBP15.41■□□□□ 0.06
PNKP-221ENST00000627317 ANAPC1Q9H1A4 1944 aa15.41■□□□□ 0.06
PNKP-221ENST00000627317 WDR87Q6ZQQ6 2873 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 TMCO5BA8MYB1 307 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 DDX3XO00571 662 aaKnown RBP eCLIP15.4■□□□□ 0.06
PNKP-221ENST00000627317 OAS1P00973 400 aaKnown RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 CALB1P05937 261 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 HDCP19113 662 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 GDI1P31150 447 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 EIF4A3P38919 411 aaKnown RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 PGFP49763 221 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 FZD5Q13467 585 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 C10orf120Q5SQS8 335 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 BSPRYQ5W0U4 402 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 WDR59Q6PJI9 974 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 TPRG1Q6ZUI0 275 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 BHLHA9Q7RTU4 235 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 ZDHHC17Q8IUH5 632 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 ARL14EPQ8N8R7 260 aaPredicted RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 RNF139Q8WU17 664 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 IRF7Q92985 503 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 USP13Q92995 863 aaPredicted RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 OSBPL6Q9BZF3 934 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 SMG9Q9H0W8 520 aaKnown RBP15.4■□□□□ 0.06
PNKP-221ENST00000627317 BRD9Q9H8M2 597 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 LTB4R2Q9NPC1 389 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.4■□□□□ 0.06
PNKP-221ENST00000627317 OSER1Q9NX31 292 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 ADAM22Q9P0K1 906 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 ADAMTS1Q9UHI8 967 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 STRIP2Q9ULQ0 834 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 CCL26Q9Y258 94 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 SIT1Q9Y3P8 196 aa15.4■□□□□ 0.06
PNKP-221ENST00000627317 GOLGA8SH3BPF8 625 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 DPYSL4O14531 572 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 CHADO15335 359 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 COCHO43405 550 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 DCNP07585 359 aaKnown RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 MBL2P11226 248 aaPredicted RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 CD72P21854 359 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 TARSP26639 723 aaKnown RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 GABRB2P47870 512 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 GSE1Q14687 1217 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 C2CD6Q53TS8 623 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 EFHC1Q5JVL4 640 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 FAM102AQ5T9C2 384 aaPredicted RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 ACAD10Q6JQN1 1059 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 OLFML1Q6UWY5 402 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 XYLT1Q86Y38 959 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 PHF13Q86YI8 300 aaPredicted RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 EDEM1Q92611 657 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 CLDN23Q96B33 292 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 PANX2Q96RD6 677 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 SLC22A12Q96S37 553 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms