RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
TRIM29-221ENST00000627238 DSPP15924 2871 aaKnown RBP17.4■□□□□ 0.38
TRIM29-221ENST00000627238 ZFYVE26Q68DK2 2539 aa17.4■□□□□ 0.38
TRIM29-221ENST00000627238 PRRT4C9JH25 899 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 NEDD8-MDP1E9PL57 170 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 H0Y626 953 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 TRIM16O95361 564 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 TBX18O95935 607 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 MYL1P05976 194 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 CISD3P0C7P0 127 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 NDUFV2P19404 249 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 TRIM21P19474 475 aaKnown RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 AFMP43652 599 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 PSEN1P49768 467 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 ZNF132P52740 706 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 HNRNPDQ14103 355 aaKnown RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 NFIL3Q16649 462 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 C1orf220Q5T0J3 134 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 SDE2Q6IQ49 451 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 GPRIN1Q7Z2K8 1008 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 METTL3Q86U44 580 aaKnown RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 SLC41A1Q8IVJ1 513 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 CHPFQ8IZ52 775 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 C12orf29Q8N999 325 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 SNX21Q969T3 373 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 DNAAF2Q9NVR5 837 aaKnown RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 TRAF3IP3Q9Y228 551 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 SLC27A6Q9Y2P4 619 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 MSRB2Q9Y3D2 182 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
TRIM29-221ENST00000627238 ADAMTS9Q9P2N4 1935 aa17.39■□□□□ 0.37
TRIM29-221ENST00000627238 ARHGAP33O14559 1287 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 ACTN4O43707 911 aaKnown RBP17.38■□□□□ 0.37
TRIM29-221ENST00000627238 NR3C1P04150 777 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 CFIP05156 583 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
TRIM29-221ENST00000627238 IRF1P10914 325 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 SPINK2P20155 84 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 MCCD1P59942 119 aaPredicted RBP17.38■□□□□ 0.37
TRIM29-221ENST00000627238 SLC14A1Q13336 389 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 ENPP2Q13822 863 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 KIAA1211LQ6NV74 962 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 CCDC186Q7Z3E2 898 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 HDDC3Q8N4P3 179 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 ACOX2Q99424 681 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 CYP3A43Q9HB55 503 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 NFE2L3Q9Y4A8 694 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 USP3Q9Y6I4 520 aa17.38■□□□□ 0.37
TRIM29-221ENST00000627238 NPC1O15118 1278 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 ZBTB24O43167 697 aaPredicted RBP17.37■□□□□ 0.37
TRIM29-221ENST00000627238 CYP26A1O43174 497 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 OPHN1O60890 802 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 GJB3O75712 270 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 F13A1P00488 732 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 PENKP01210 267 aaPredicted RBP17.37■□□□□ 0.37
TRIM29-221ENST00000627238 PLA2G4AP47712 749 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 ME1P48163 572 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 DGKGP49619 791 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 KIF11P52732 1056 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 ATXN3P54252 364 aaPredicted RBP17.37■□□□□ 0.37
TRIM29-221ENST00000627238 KMT5BQ4FZB7 885 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 TOGARAM2Q6ZUX3 1019 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 FOXJ1Q92949 421 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 ELMO3Q96BJ8 720 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 FAXDC2Q96IV6 333 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 MRGPRX1Q96LB2 322 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 TWNKQ96RR1 684 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 NT5C1AQ9BXI3 368 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 FAM124BQ9H5Z6 455 aaPredicted RBP17.37■□□□□ 0.37
TRIM29-221ENST00000627238 NMUR1Q9HB89 426 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 FAM49BQ9NUQ9 324 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 EXOC1Q9NV70 894 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 CLIC5Q9NZA1 410 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 SUSD2Q9UGT4 822 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 DNMT3LQ9UJW3 386 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 RCOR1Q9UKL0 485 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 ZNF510Q9Y2H8 683 aa17.37■□□□□ 0.37
TRIM29-221ENST00000627238 CILPO75339 1184 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 HLA-DRAP01903 254 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 SYPP08247 313 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 RARGP13631 454 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 CD59P13987 128 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 ACO1P21399 889 aaKnown RBP17.36■□□□□ 0.37
TRIM29-221ENST00000627238 WASP42768 502 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 ORC1Q13415 861 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 SPOPLQ6IQ16 392 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 TADA2BQ86TJ2 420 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 MINDY1Q8N5J2 469 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 TRIML1Q8N9V2 468 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 CYFIP2Q96F07 1278 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 HSPA12BQ96MM6 686 aa17.36■□□□□ 0.37
TRIM29-221ENST00000627238 CDK5RAP1Q96SZ6 601 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms