RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 TLR3O15455 904 aaKnown RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 ITGAVP06756 1048 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 IGFBP6P24592 240 aaPredicted RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 ZNF132P52740 706 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 GEMIN4P57678 1058 aaKnown RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 GSTCDQ8NEC7 633 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 ZNF75CPQ92670 426 aaPredicted RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 SLC7A6OSQ96CW6 309 aaPredicted RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 PPP1R10Q96QC0 940 aaKnown RBP18.33■□□□□ 0.52
PCF11-207ENST00000624931 PPP1R12CQ9BZL4 782 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 VPS11Q9H270 941 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 VPS37BQ9H9H4 285 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 STOML1Q9UBI4 398 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 ZFP69BQ9UJL9 534 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 HAO1Q9UJM8 370 aa18.33■□□□□ 0.52
PCF11-207ENST00000624931 POC1B-GALNT4F8VUJ3 575 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 CCDC22O60826 627 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 SPAG7O75391 227 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 SCNN1GP51170 649 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 ARSEP51690 589 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 RAD23BP54727 409 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 TAS2R40P59535 323 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 TLE2Q04725 743 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 PKN2Q16513 984 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 MRPL10Q7Z7H8 261 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 SCLYQ96I15 445 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 PWWP2AQ96N64 755 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 TWNKQ96RR1 684 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 SQORQ9Y6N5 450 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 ARL5CA6NH57 179 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 CALB1P05937 261 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 T-ENOLP0DO92 83 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 COL6A1P12109 1028 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 TARSP26639 723 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 ATICP31939 592 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 VCPP55072 806 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 BFSP2Q13515 415 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 LLGL1Q15334 1064 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 RNASEH2BQ5TBB1 312 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 NLRP9Q7RTR0 991 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 ATP11CQ8NB49 1132 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 TTC13Q8NBP0 860 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
PCF11-207ENST00000624931 SPATS2LQ9NUQ6 558 aaKnown RBP18.32■□□□□ 0.52
PCF11-207ENST00000624931 A0A0U1RQF3 1178 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 FOXO6A8MYZ6 492 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 SPTLC1O15269 473 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 TGDSO95455 350 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 PECAM1P16284 738 aaPredicted RBP18.31■□□□□ 0.52
PCF11-207ENST00000624931 BRD2P25440 801 aaKnown RBP18.31■□□□□ 0.52
PCF11-207ENST00000624931 GNA15P30679 374 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 RPA3P35244 121 aaPredicted RBP18.31■□□□□ 0.52
PCF11-207ENST00000624931 PCK1P35558 622 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 SSR1P43307 286 aaKnown RBP18.31■□□□□ 0.52
PCF11-207ENST00000624931 CCL23P55773 120 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 GPS1Q13098 491 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 C11orf70Q9BRQ4 267 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 OSBPL1AQ9BXW6 950 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 INPP5FQ9Y2H2 1132 aa18.31■□□□□ 0.52
PCF11-207ENST00000624931 TET1Q8NFU7 2136 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 DNAJC6O75061 913 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 LSM8O95777 96 aaKnown RBP18.3■□□□□ 0.52
PCF11-207ENST00000624931 IL1BP01584 269 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 GJA8P48165 433 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 RAB27AP51159 221 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 ARL4CP56559 192 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 PIGHQ14442 188 aaPredicted RBP18.3■□□□□ 0.52
PCF11-207ENST00000624931 LVRNQ6Q4G3 990 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 ADGRD1Q6QNK2 874 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 SPOCD1Q6ZMY3 1216 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 OTOAQ7RTW8 1153 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 ZNF518BQ9C0D4 1074 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 ELOVL4Q9GZR5 314 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 MMADHCQ9H3L0 296 aaPredicted RBP18.3■□□□□ 0.52
PCF11-207ENST00000624931 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 DNPEPQ9ULA0 475 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 MTO1Q9Y2Z2 717 aaKnown RBP18.3■□□□□ 0.52
PCF11-207ENST00000624931 SNX9Q9Y5X1 595 aa18.3■□□□□ 0.52
PCF11-207ENST00000624931 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.3■□□□□ 0.52
PCF11-207ENST00000624931 LRRD1A4D1F6 860 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 PIRO00625 290 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 ZNF623O75123 536 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
PCF11-207ENST00000624931 POMCP01189 267 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 KRT1P04264 644 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 TAF1BQ53T94 588 aaPredicted RBP18.29■□□□□ 0.52
PCF11-207ENST00000624931 ANKRD33Q7Z3H0 272 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
PCF11-207ENST00000624931 KIRREL3Q8IZU9 778 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 ARHGAP24Q8N264 748 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 DBF4BQ8NFT6 615 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 TFAP2BQ92481 460 aa18.29■□□□□ 0.52
PCF11-207ENST00000624931 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms