RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ATF4P18848 351 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SBK1Q52WX2 424 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF366Q8N895 744 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PFDN1O60925 122 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 CD2BP2O95400 341 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 USP11P51784 963 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 OGFOD2Q6N063 350 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 FBXO33Q7Z6M2 555 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PROM2Q8N271 834 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 DEFB118Q96PH6 123 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MTMR9Q96QG7 549 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 C2orf49Q9BVC5 232 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PRKAG3Q9UGI9 489 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 POU2F3Q9UKI9 436 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SLC16A4O15374 487 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TRIM13O60858 407 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 GLP2RO95838 553 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ITGAVP06756 1048 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 GIMD1P0DJR0 217 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TALDO1P37837 337 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TOB2Q14106 344 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 KLHL31Q9H511 634 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 IFT52Q9Y366 437 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 THOC2Q8NI27 1593 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ADGRA2Q96PE1 1338 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TMEM114B3SHH9 223 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 H0YJX3 145 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PLD2O14939 933 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 CCDC166P0CW27 439 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ARL6IP4Q66PJ3 421 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TMEM154Q6P9G4 183 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PAGE2Q7Z2X7 111 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PTAR1Q7Z6K3 402 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SH3GL1Q99961 368 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ADA2Q9NZK5 511 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ATP9BO43861 1147 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PALMO75781 387 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 POU1F1P28069 291 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PKDCCQ504Y2 493 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TRPV3Q8NET8 790 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF354BQ96LW1 612 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 RRN3Q9NYV6 651 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 KIF24Q5T7B8 1368 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 FAM220BPB1ANY3 271 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 NLRP11P59045 1033 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 P2RX5Q93086 422 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SESN1Q9Y6P5 492 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MYO10Q9HD67 2058 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 INSRP06213 1382 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 GSAPA4D1B5 854 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 USP17L7P0C7H9 530 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 KCNK10P57789 538 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 C1DQ13901 141 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 CCDC126Q96EE4 140 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SLC38A3Q99624 504 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 KIFC1Q9BW19 673 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SCN3BQ9NY72 215 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 COMMD9Q9P000 198 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PCDH10Q9P2E7 1040 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 NDRG2Q9UN36 371 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 AKAP8O43823 692 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SERPING1P05155 500 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 MLLT1Q03111 559 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 KLC1Q07866 573 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 MAP1SQ66K74 1059 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 DOK6Q6PKX4 331 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 MIB1Q86YT6 1006 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 C8orf58Q8NAV2 365 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ARNTL2Q8WYA1 636 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TM9SF4Q92544 642 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ZNHIT2Q9UHR6 403 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SLC12A8A0AV02 714 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 UBXN7O94888 489 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 VAV1P15498 845 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 EMC2Q15006 297 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 HYKKA2RU49 373 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SIN3BO75182 1162 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CSTBP04080 98 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PSEN1P49768 467 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 RGS8P57771 180 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 EFEMP1Q12805 493 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 LRRC8DQ7L1W4 858 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 INTS9Q9NV88 658 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 KDM5AP29375 1690 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 EIF3BP55884 814 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 FOXM1Q08050 763 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SGCBQ16585 318 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SENP7Q9BQF6 1050 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CLIC5Q9NZA1 410 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PAIP2BQ9ULR5 123 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ALDH9A1P49189 494 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SLC44A4Q53GD3 710 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TTI2Q6NXR4 508 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 DPH5Q9H2P9 285 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 HPS4Q9NQG7 708 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms