RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.567e-8■■■■■ 109
LINC00963-214ENST00000622680 OSER1Q9NX31 292 aa11.58□□□□□ -0.56
LINC00963-214ENST00000622680 CACNA2D2Q9NY47 1150 aa11.58□□□□□ -0.56
LINC00963-214ENST00000622680 PLK2Q9NYY3 685 aa11.58□□□□□ -0.56
LINC00963-214ENST00000622680 NUDT5Q9UKK9 219 aa11.58□□□□□ -0.56
LINC00963-214ENST00000622680 WASH3PC4AMC7 463 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 PPP6R2O75170 966 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 FAM163BP0C2L3 166 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 CD59P13987 128 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 DPP6P42658 865 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 AFMP43652 599 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 NDST1P52848 882 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 AMPD3Q01432 767 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 CUL4BQ13620 913 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 KIAA1324Q6UXG2 1013 aaKnown RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 SLC36A4Q6YBV0 504 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 C12orf56Q8IXR9 622 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 CHCHD4Q8N4Q1 142 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 IQUBQ8NA54 791 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 CEP76Q8TAP6 659 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 PARD3BQ8TEW8 1205 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 TWNKQ96RR1 684 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 GABRG3Q99928 467 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 ZSCAN16Q9H4T2 348 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 TLR8Q9NR97 1041 aaKnown RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 MSRB2Q9Y3D2 182 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
LINC00963-214ENST00000622680 ARID1BQ8NFD5 2236 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-214ENST00000622680 UPK3BL1B0FP48 263 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 UPK3BL2E5RIL1 263 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 CUTAO60888 179 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 C4BPAP04003 597 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 MAOBP27338 520 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 ASPAP45381 313 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 DGKGP49619 791 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 SNRPFP62306 86 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 RING1Q06587 406 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 PLEKHG6Q3KR16 790 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 PREPLQ4J6C6 727 aaPredicted RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 CLEC20AQ6ZU45 233 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 CACUL1Q86Y37 369 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 RGL4Q8IZJ4 473 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 KIAA0895Q8NCT3 520 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 MRGPRX1Q96LB2 322 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 XPO6Q96QU8 1125 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 DUSP9Q99956 384 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 NMUR1Q9HB89 426 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 MARK1Q9P0L2 795 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 LSM7Q9UK45 103 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 STARD13Q9Y3M8 1113 aa11.56□□□□□ -0.56
LINC00963-214ENST00000622680 SETXQ7Z333 2677 aaKnown RBP11.56□□□□□ -0.56
LINC00963-214ENST00000622680 ASXL3Q9C0F0 2248 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 A0A1W2PQH9 124 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 HHLA1C9JL84 531 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 TAF4O00268 1085 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 SH3BP5O60239 455 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 NDUFS2O75306 463 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 GJB3O75712 270 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 YEATS4O95619 227 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 FAM200BP0CF97 657 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 PIK3CAP42336 1068 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 CLDN10P78369 228 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 GRIK2Q13002 908 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 RABEPKQ7Z6M1 372 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
LINC00963-214ENST00000622680 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 MAGEF1Q9HAY2 307 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 CSNK1G1Q9HCP0 422 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 CYLDQ9NQC7 956 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
LINC00963-214ENST00000622680 COMMD8Q9NX08 183 aa11.55□□□□□ -0.56
LINC00963-214ENST00000622680 CGNQ9P2M7 1197 aaKnown RBP11.55□□□□□ -0.56
LINC00963-214ENST00000622680 HELZ2Q9BYK8 2649 aaKnown RBP11.55□□□□□ -0.56
LINC00963-214ENST00000622680 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 MEI4A8MW99 385 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 KLRC4O43908 158 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ZNF217O75362 1048 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 STC2O76061 302 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 HLA-DRAP01903 254 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 SYPP08247 313 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 HMBSP08397 361 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 CISD3P0C7P0 127 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 RARGP13631 454 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ACO1P21399 889 aaKnown RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
LINC00963-214ENST00000622680 GOLGA8FQ08AF8 430 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 GOLGA8DPQ0D2H9 430 aa11.54□□□□□ -0.56
LINC00963-214ENST00000622680 STK4Q13043 487 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms