RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TINF2Q9BSI4 451 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 DPEP3Q9H4B8 488 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 MKS1Q9NXB0 559 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 HEY1Q9Y5J3 304 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 USP3Q9Y6I4 520 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 NRCAMQ92823 1304 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 TRAFD1O14545 582 aaPredicted RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 TGDSO95455 350 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 INHBAP08476 426 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 KCNE1P15382 129 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 CYP2F1P24903 491 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 GTF2A2P52657 109 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 FAAP100Q0VG06 881 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 PRPF39Q86UA1 669 aaKnown RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 PNMA8AQ86V59 439 aaPredicted RBP9.79□□□□□ -0.84
PDPN-212ENST00000621990 INPP5DQ92835 1189 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 QKIQ96PU8 341 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDPN-212ENST00000621990 CDHR5Q9HBB8 845 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
PDPN-212ENST00000621990 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SLC15A5A6NIM6 579 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 A8MXQ7 604 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 KLF11O14901 512 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 LPXNO60711 386 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 RECQL4O94761 1208 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 CD4P01730 458 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 T-ENOLP0DO92 83 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 ACADSBP45954 432 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 YWHAGP61981 247 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDPN-212ENST00000621990 ADAM17P78536 824 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SLC10A2Q12908 348 aaPredicted RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 PLEKHG4Q58EX7 1191 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 FBXO47Q5MNV8 452 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 TTC39BQ5VTQ0 682 aaPredicted RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 FYB2Q5VWT5 728 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 STRADAQ7RTN6 431 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 CATSPER4Q7RTX7 472 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 BNIPLQ7Z465 357 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 PSTKQ8IV42 348 aaKnown RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 KIF2BQ8N4N8 673 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 OR6B3Q8NGW1 331 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 CLEC4CQ8WTT0 213 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 BRI3BPQ8WY22 251 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 PTPRN2Q92932 1015 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 HSFY1Q96LI6 401 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 OLFM3Q96PB7 478 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 NXF3Q9H4D5 531 aaKnown RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 MANSC1Q9H8J5 431 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 PRDM16Q9HAZ2 1276 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 RCOR3Q9P2K3 495 aaPredicted RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 ZC3H7BQ9UGR2 993 aaKnown RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 TRIM33Q9UPN9 1127 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 IKBKGQ9Y6K9 419 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 TSC2P49815 1807 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SPTLC1O15269 473 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 WFS1O76024 890 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SMIM10L2AP0DMW4 78 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SMIM10L2BP0DMW5 78 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDPN-212ENST00000621990 CCNFP41002 786 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 PNPLA4P41247 253 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 GBE1Q04446 702 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 CTC1Q2NKJ3 1217 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 CYS1Q717R9 158 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 LRRC6Q86X45 466 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 UTP4Q969X6 686 aaKnown RBP9.78□□□□□ -0.84
PDPN-212ENST00000621990 CSPG4P5Q96PW8 444 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 EBF2Q9HAK2 575 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 BAIAP2L1Q9UHR4 511 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 HES2Q9Y543 173 aa9.78□□□□□ -0.84
PDPN-212ENST00000621990 SMIM28A0A1B0GU29 152 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 KPNA7A9QM74 516 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 GOLGA8RI6L899 631 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 METTL18O95568 372 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 APOEP02649 317 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 APRTP07741 180 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 SEMA5AQ13591 1074 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 PRKD1Q15139 912 aaPredicted RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 PPP6R3Q5H9R7 873 aaPredicted RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 DPP9Q86TI2 863 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 VPS52Q8N1B4 723 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 C7orf31Q8N865 590 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 CCDC110Q8TBZ0 833 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 SIGLEC10Q96LC7 697 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 ZNF560Q96MR9 790 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 RAB3IPQ96QF0 476 aaPredicted RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 KCTD15Q96SI1 283 aaPredicted RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 OSMRQ99650 979 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 LPIN3Q9BQK8 851 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 SAR1AQ9NR31 198 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 AP4E1Q9UPM8 1137 aa9.77□□□□□ -0.84
PDPN-212ENST00000621990 GNEQ9Y223 722 aaKnown RBP9.77□□□□□ -0.84
PDPN-212ENST00000621990 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 FAM159BA6NKW6 160 aa9.77□□□□□ -0.85
PDPN-212ENST00000621990 CXorf49A8MYA2 514 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms