RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 EDEM1Q92611 657 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 FUBP3Q96I24 572 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPAST-204ENST00000621856 KCTD15Q96SI1 283 aaPredicted RBP22.33■■□□□ 1.17
SPAST-204ENST00000621856 TMEM106CQ9BVX2 250 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 FAM129AQ9BZQ8 928 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 RRN3Q9NYV6 651 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 FZD10Q9ULW2 581 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 NEU2Q9Y3R4 380 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 H7C4K7 107 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 SGK1O00141 431 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 APOL1O14791 398 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 MCF2LO15068 1137 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 DGKIO75912 1065 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 TIMP1P01033 207 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 CPB1P15086 417 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 PECAM1P16284 738 aaPredicted RBP22.32■■□□□ 1.16
SPAST-204ENST00000621856 ALDH7A1P49419 539 aaKnown RBP22.32■■□□□ 1.16
SPAST-204ENST00000621856 SLC5A3P53794 718 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 EIF3EP60228 445 aaKnown RBP22.32■■□□□ 1.16
SPAST-204ENST00000621856 CFAP58Q5T655 872 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 BNIPLQ7Z465 357 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 TMEM173Q86WV6 379 aaPredicted RBP22.32■■□□□ 1.16
SPAST-204ENST00000621856 FAM71BQ8TC56 605 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 CCHCR1Q8TD31 782 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 ART4Q93070 314 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 VWCEQ96DN2 955 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 PGLYRP2Q96PD5 576 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 TRIM62Q9BVG3 475 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 USP3Q9Y6I4 520 aa22.32■■□□□ 1.16
SPAST-204ENST00000621856 ABHD14A-ACY1A0A1B0GW23 586 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 ZNF487B1APH4 448 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 ITIH2P19823 946 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 IL4RP24394 825 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 CBX1P83916 185 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 HSP90B2PQ58FF3 399 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 SPOUT1Q5T280 376 aaKnown RBP22.31■■□□□ 1.16
SPAST-204ENST00000621856 BSPRYQ5W0U4 402 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 ALS2CLQ60I27 953 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 C1orf228Q6PIY5 440 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 VSTM1Q6UX27 236 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 NPNTQ6UXI9 565 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 ADAM32Q8TC27 787 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 BCL7CQ8WUZ0 217 aaPredicted RBP22.31■■□□□ 1.16
SPAST-204ENST00000621856 P3H4Q92791 437 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 RUFY1Q96T51 708 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 TMEM121Q9BTD3 319 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 FAM204AQ9H8W3 233 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 PIGVQ9NUD9 493 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 LTBP2Q14767 1821 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 TRIM66O15016 1216 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 AMHP03971 560 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 RAG1P15918 1043 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
SPAST-204ENST00000621856 DHX9Q08211 1270 aaKnown RBP22.31■■□□□ 1.16
SPAST-204ENST00000621856 RTP2Q5QGT7 225 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 TMC3Q7Z5M5 1100 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 PRUNE1Q86TP1 453 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 PSTKQ8IV42 348 aaKnown RBP22.31■■□□□ 1.16
SPAST-204ENST00000621856 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 TTPALQ9BTX7 342 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 DDIT4Q9NX09 232 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 MYO16Q9Y6X6 1858 aa22.31■■□□□ 1.16
SPAST-204ENST00000621856 TRIM43BA6NCK2 446 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 TNFRSF10BO14763 440 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 CSF2RAP15509 400 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 TGM2P21980 687 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 KLRC2P26717 231 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 OAS2P29728 719 aaKnown RBP22.3■■□□□ 1.16
SPAST-204ENST00000621856 ARL4AP40617 200 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 MTMR3Q13615 1198 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 NOMO1Q15155 1222 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 ANKS3Q6ZW76 656 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 PQLC3Q8N755 202 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 BBOF1Q8ND07 529 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 TRIM43Q96BQ3 446 aaPredicted RBP22.3■■□□□ 1.16
SPAST-204ENST00000621856 FAF2Q96CS3 445 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 MAGEB5Q9BZ81 275 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 CWH43Q9H720 699 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 MTMR10Q9NXD2 777 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 ANAPC5Q9UJX4 755 aa22.3■■□□□ 1.16
SPAST-204ENST00000621856 H3BQF6 201 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 KIAA0355O15063 1070 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 ITGB8P26012 769 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 IVDP26440 423 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 MAGEA11P43364 429 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 ITGA8P53708 1063 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 YWHAGP61981 247 aaKnown RBP eCLIP22.29■■□□□ 1.16
SPAST-204ENST00000621856 DDR2Q16832 855 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 EFHC2Q5JST6 749 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 SLC9A4Q6AI14 798 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 FAM117BQ6P1L5 589 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 TAS1R1Q7RTX1 841 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 PYROXD2Q8N2H3 581 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 PLD5Q8N7P1 536 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 UBLCP1Q8WVY7 318 aaPredicted RBP22.29■■□□□ 1.16
SPAST-204ENST00000621856 RSAD2Q8WXG1 361 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 C8orf48Q96LL4 319 aa22.29■■□□□ 1.16
SPAST-204ENST00000621856 F9P00740 461 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 IFNB1P01574 187 aa22.28■■□□□ 1.16
SPAST-204ENST00000621856 ZSCAN5DPP0CG00 497 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms