RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MAN1C1Q9NR34 630 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 RAPGEFL1Q9UHV5 662 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 MGAT4AQ9UM21 535 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SLC30A1Q9Y6M5 507 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DIP2BQ9P265 1576 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 HAT1O14929 419 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 LDOC1O95751 146 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 CNPP09543 421 aaKnown RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF24P17028 368 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 EFNA5P52803 228 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SLC16A1P53985 500 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 COASYQ13057 564 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 DUOXA2Q1HG44 320 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 SCARA5Q6ZMJ2 495 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 FOXP4Q8IVH2 680 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 EPB41L4AQ9HCS5 686 aaPredicted RBP7.38□□□□□ -1.23
COLCA1-205ENST00000620864 RPS6KB2Q9UBS0 482 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
COLCA1-205ENST00000620864 PDGFRBP09619 1106 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ATF6P18850 670 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 HK2P52789 917 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 HSF2Q03933 536 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MDH1BQ5I0G3 518 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CES5AQ6NT32 575 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 EIF3MQ7L2H7 374 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PM20D2Q8IYS1 436 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ANKRD13AQ8IZ07 590 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 C1orf54Q8WWF1 131 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CAVIN3Q969G5 261 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MYDGFQ969H8 173 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 C18orf8Q96DM3 657 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 KCTD14Q9BQ13 255 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 FICDQ9BVA6 458 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ADGRA2Q96PE1 1338 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CPSF1Q10570 1443 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CPS1P31327 1500 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L15C9J2P7 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L13C9JLJ4 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L11C9JVI0 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L18D6R9N7 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L22D6RA61 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L17D6RBQ6 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L19D6RCP7 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L20D6RJB6 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CYP2D6P10635 497 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ALOX15P16050 662 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 NDUFV1P49821 464 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CHN2P52757 468 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 USP17L24Q0WX57 530 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CAMK1DQ8IU85 385 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ATG16L2Q8NAA4 619 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TSEN34Q9BSV6 310 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GPN1Q9HCN4 374 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RAD18Q9NS91 495 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 AFF4Q9UHB7 1163 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 DUSP12Q9UNI6 340 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PNPLA6Q8IY17 1366 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PSMD12O00232 456 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CLOCKO15516 846 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 SSNA1O43805 119 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ATG7O95352 703 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 SOAT1P35610 550 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PRCPP42785 496 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RPS7P62081 194 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RASA2Q15283 850 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RNF180Q86T96 592 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CLVS1Q8IUQ0 354 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ARID3BQ8IVW6 561 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GPD1LQ8N335 351 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MINDY2Q8NBR6 621 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 STK32AQ8WU08 396 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 KATNAL1Q9BW62 490 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 NCKIPSDQ9NZQ3 722 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 FBXO40Q9UH90 709 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CEP152O94986 1710 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM114B3SHH9 223 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PRRG1O14668 218 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TSPAN19P0C672 248 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 FDX1P10109 184 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GYS1P13807 737 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 EIF2AK2P19525 551 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 IL5RAQ01344 420 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF284Q2VY69 593 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TYW3Q6IPR3 259 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ACTRT2Q8TDY3 377 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GDPD5Q8WTR4 605 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PRDM8Q9NQV8 689 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RAB6BQ9NRW1 208 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MINPP1Q9UNW1 487 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 DRG1Q9Y295 367 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 BCLAF3A2AJT9 711 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RGL2O15211 777 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 NCAM2O15394 837 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GSTT1P30711 240 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CHI3L1P36222 383 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms