RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TRMT10BQ6PF06 316 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 RNF111Q6ZNA4 994 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ACAD11Q709F0 780 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ARCQ7LC44 396 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 OR6Y1Q8NGX8 325 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 TRIM56Q9BRZ2 755 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 XAB2Q9HCS7 855 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ETNK2Q9NVF9 386 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 THAP1Q9NVV9 213 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ASNSD1Q9NWL6 643 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 IL1RAPL1Q9NZN1 696 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 PHIPQ8WWQ0 1821 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 FAM159BA6NKW6 160 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 GABRB2P47870 512 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 DYNC1I2Q13409 638 aaKnown RBP20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 SLC5A9Q2M3M2 681 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 EFHC1Q5JVL4 640 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 RABGAP1LQ5R372 815 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 DHDDSQ86SQ9 333 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 ADGRF2Q8IZF7 708 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 RNF157Q96PX1 679 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 GSRP00390 522 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 RBL1P28749 1068 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 ZNF143P52747 638 aaPredicted RBP20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 RASIP1Q5U651 963 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 TRNP1Q6NT89 227 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 PLD5Q8N7P1 536 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 PYDC1Q8WXC3 89 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 ACO2Q99798 780 aaKnown RBP20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 MRPL4Q9BYD3 311 aaKnown RBP20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 ZCWPW1Q9H0M4 648 aa20.28■□□□□ 0.84
PDLIM3-212ENST00000620787 APRTP07741 180 aa20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 CDH8P55286 799 aa20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 TARBP2Q15633 366 aaKnown RBP20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 ZBED3Q96IU2 234 aaPredicted RBP20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 ADPGKQ9BRR6 497 aa20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 KLC2Q9H0B6 622 aa20.27■□□□□ 0.84
PDLIM3-212ENST00000620787 CCNT2O60583 730 aaKnown RBP20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 L1CAMP32004 1257 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 MAGEA3P43357 314 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 MSLNQ13421 630 aaPredicted RBP20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 SURF1Q15526 300 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 SFT2D3Q587I9 215 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 FAM102AQ5T9C2 384 aaPredicted RBP20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 LRRC39Q96DD0 335 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 TWNKQ96RR1 684 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 CENPKQ9BS16 269 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 APOL6Q9BWW8 343 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 BCO2Q9BYV7 579 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 HMGXB4Q9UGU5 601 aa20.27■□□□□ 0.83
PDLIM3-212ENST00000620787 ARHGAP42A6NI28 874 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 ITM2AO43736 263 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 LYPLA1O75608 230 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MICAL2O94851 1124 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 PIM1P11309 404 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 RALGPS1Q5JS13 557 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 SMYD5Q6GMV2 418 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 ZNF534Q76KX8 674 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MARK2Q7KZI7 788 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 RASSF3Q86WH2 238 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 POU5F2Q8N7G0 328 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MCUQ8NE86 351 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 GSDMBQ8TAX9 411 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 SIGLEC10Q96LC7 697 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 SIKE1Q9BRV8 207 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 SLC4A7Q9Y6M7 1214 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 WNT10BO00744 389 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 ZBED1O96006 694 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 GPD1P21695 349 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 IL4RP24394 825 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 IRX4P78413 519 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 CCNIQ14094 377 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 PDCD2Q16342 344 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 C15orf59Q2T9L4 293 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 FASTKD1Q53R41 847 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MBLAC2Q68D91 279 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MPP5Q8N3R9 675 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 PQLC3Q8N755 202 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 PRPF31Q8WWY3 499 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 MMP19Q99542 508 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 SMYD3Q9H7B4 428 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 ADAMTS6Q9UKP5 1117 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 ZNF214Q9UL59 606 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 DNAJC16Q9Y2G8 782 aa20.26■□□□□ 0.83
PDLIM3-212ENST00000620787 IGKV6D-21A0A0A0MT36 114 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 BCLAF3A2AJT9 711 aaKnown RBP20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 TNNC2P02585 160 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 HMGCRP04035 888 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 SERPINB9P50453 376 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 CFAP157Q5JU67 520 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 TEDDM1Q5T9Z0 273 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 PGM2L1Q6PCE3 622 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 TIFABQ6ZNK6 161 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 ST13P4Q8IZP2 240 aaPredicted RBP20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 PIWIL2Q8TC59 973 aaKnown RBP20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 LRRN4Q8WUT4 740 aa20.25■□□□□ 0.83
PDLIM3-212ENST00000620787 TEPSINQ96N21 525 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms