RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 SYT11Q9BT88 431 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SNX25Q9H3E2 840 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A7Q9HAW7 530 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A10Q9HAW8 530 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A8Q9HAW9 530 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ARMCX1Q9P291 453 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 EPS15L1Q9UBC2 864 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 POU2F3Q9UKI9 436 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SOX13Q9UN79 622 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 TCRBV7S2A1N4TA0A589 114 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 CDK2AP1O14519 115 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ETV3P41162 512 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 KRT6CP48668 564 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 THOP1P52888 689 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 HSPA14Q0VDF9 509 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SIX1Q15475 284 aaPredicted RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 PKN2Q16513 984 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 CRY1Q16526 586 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 PRR16Q569H4 304 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 HP1BP3Q5SSJ5 553 aaPredicted RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 STYK1Q6J9G0 422 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 PGM2L1Q6PCE3 622 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 C4orf22Q6V702 233 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 TICAM1Q8IUC6 712 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SLFN12Q8IYM2 578 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 RTKN2Q8IZC4 609 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 MYO1HQ8N1T3 1032 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 EXD1Q8NHP7 514 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 HELQQ8TDG4 1101 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ISOC1Q96CN7 298 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 MOV10Q9HCE1 1003 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 CHORDC1Q9UHD1 332 aaPredicted RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 SLX4Q8IY92 1834 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ZBTB5O15062 677 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 CLOCKO15516 846 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 TGFB1I1O43294 461 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 SLC26A4O43511 780 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 ATP5BP06576 529 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 TRIM49P0CI25 452 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 TRIM49CP0CI26 452 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 MYL2P10916 166 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 COMTP21964 271 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ADSLP30566 484 aaPredicted RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 DLG4P78352 724 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 LLGL1Q15334 1064 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 OASLQ15646 514 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 BMT2Q1RMZ1 405 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 TRIM16LQ309B1 348 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 LSM12Q3MHD2 195 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 STRIP1Q5VSL9 837 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 KBTBD6Q86V97 674 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 CADM3Q8N126 398 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 C4orf33Q8N1A6 199 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 LSMEM1Q8N8F7 131 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ATL1Q8WXF7 558 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 HPS1Q92902 700 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 LRGUKQ96M69 825 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 FBXL18Q96ME1 805 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 MROQ9BYG7 248 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ANO3Q9BYT9 981 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 INO80BQ9C086 356 aaPredicted RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 B3GNT4Q9C0J1 378 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 GPR88Q9GZN0 384 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 PPCSQ9HAB8 311 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 AASDHPPTQ9NRN7 309 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 KIAA1257Q9ULG3 409 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 PCDHGA3Q9Y5H0 932 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 MYO3BQ8WXR4 1341 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 EXOC1LA0A1B0GW35 172 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 PSMD12O00232 456 aaPredicted RBP10.72□□□□□ -0.69
VPS11-207ENST00000620429 SLC22A1O15245 554 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 SPATA31C1P0DKV0 1188 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 KRT15P19012 456 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 RPA1P27694 616 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 STAT2P52630 851 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ITGA8P53708 1063 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ADAM17P78536 824 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 KRT17Q04695 432 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 PRKG1Q13976 671 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 GK3PQ14409 553 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 CBWD6Q4V339 395 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 CBWD3Q5JTY5 395 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 RABGAP1LQ5R372 815 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 CBWD5Q5RIA9 395 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 AGAP7PQ5VUJ5 663 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 C11orf63Q6NUN7 778 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 ISLR2Q6UXK2 745 aa10.72□□□□□ -0.69
VPS11-207ENST00000620429 PRUNE1Q86TP1 453 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms