RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RALAP11233 206 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 NCAM1P13591 858 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 RARGP13631 454 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PTPN2P17706 415 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 CASQ1P31415 396 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PCK1P35558 622 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 NRIP1P48552 1158 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 RPS6KA1Q15418 735 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 C15orf59Q2T9L4 293 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PABPC1LQ4VXU2 614 aaKnown RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 TMEM184AQ6ZMB5 413 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 BNIPLQ7Z465 357 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 CPNE8Q86YQ8 564 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PDZD8Q8NEN9 1154 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 EDEM1Q92611 657 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 CD101Q93033 1021 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 HES6Q96HZ4 224 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 CFAP57Q96MR6 1250 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 NAPGQ99747 312 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 TLR10Q9BXR5 811 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 LRRC3Q9BY71 257 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 TTYH1Q9H313 450 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 GOLPH3Q9H4A6 298 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 IL21Q9HBE4 155 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
CPNE3-209ENST00000620393 OSER1Q9NX31 292 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 ZDHHC7Q9NXF8 308 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 TRPM5Q9NZQ8 1165 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 STAP1Q9ULZ2 295 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 USTQ9Y2C2 406 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 HYOU1Q9Y4L1 999 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
CPNE3-209ENST00000620393 RANBP2P49792 3224 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CCDC195A0A1B0GUA6 201 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 MIF4GDA9UHW6 222 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 M0QYT0 321 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 ENC1O14682 589 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 FANCGO15287 622 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CCL16O15467 120 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 SPOPO43791 374 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 LRCH4O75427 683 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 RFPL2O75678 378 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TRUB2O95900 331 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 F9P00740 461 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PRLRP16471 622 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 DESP17661 470 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CTNNA2P26232 953 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 MIPP30301 263 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 GBP1P32455 592 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 SULT1E1P49888 294 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PEX5P50542 639 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 EPHA5P54756 1037 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 HDAC4P56524 1084 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TAS2R40P59535 323 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 ATP11AP98196 1134 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 EIF4EBP2Q13542 120 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 HADHQ16836 314 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 BOLA3Q53S33 107 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TCEAL5Q5H9L2 206 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 HECTD3Q5T447 861 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 LRRC38Q5VT99 294 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PAPD7Q5XG87 772 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 MSANTD2Q6P1R3 559 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TMEM150AQ86TG1 271 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TADA2BQ86TJ2 420 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 RHOT1Q8IXI2 618 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CMASQ8NFW8 434 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 KIF18AQ8NI77 898 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 RNF139Q8WU17 664 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 FAM172AQ8WUF8 416 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CASP10Q92851 521 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PGAP3Q96FM1 320 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 CDK5RAP1Q96SZ6 601 aaKnown RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TBCBQ99426 244 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PRDM12Q9H4Q4 367 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 IGFLR1Q9H665 355 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-209ENST00000620393 PCDHGA10Q9Y5H3 936 aa8.37□□□□□ -1.07
CPNE3-209ENST00000620393 TSC2P49815 1807 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 CCDC66A2RUB6 948 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
CPNE3-209ENST00000620393 NCK2O43639 380 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 TLR5O60602 858 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 XYLBO75191 536 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 FGF19O95750 216 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 TBX18O95935 607 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 IGLV3-25P01717 112 aa8.36□□□□□ -1.07
CPNE3-209ENST00000620393 ATP1A1P05023 1023 aaKnown RBP8.36□□□□□ -1.07
CPNE3-209ENST00000620393 KRT7P08729 469 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms