RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ZDHHC4Q9NPG8 344 aa23.18■■□□□ 1.3
SYNGR3-206ENST00000618464 CLIC5Q9NZA1 410 aa23.18■■□□□ 1.3
SYNGR3-206ENST00000618464 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.18■■□□□ 1.3
SYNGR3-206ENST00000618464 NCOR2Q9Y618 2525 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 O00370 1275 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 P4HA2O15460 535 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 TULP3O75386 442 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 AFPP02771 609 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 GRIA2P42262 883 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 YWHAGP61981 247 aaKnown RBP eCLIP23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 EMC10Q5UCC4 262 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 PRR23CQ6ZRP0 262 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 RSRC2Q7L4I2 434 aaKnown RBP23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 ETFBKMTQ8IXQ9 262 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 ARHGAP18Q8N392 663 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 ALLCQ8N6M5 410 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 TSTD1Q8NFU3 115 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 TFAP2BQ92481 460 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 BHMTQ93088 406 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 LRRC4Q9HBW1 653 aa23.17■■□□□ 1.3
SYNGR3-206ENST00000618464 CCDC163A0A0D9SF12 145 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 NEDD8-MDP1E9PL57 170 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 RNF225M0QZC1 329 aaPredicted RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 TRIM24O15164 1050 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 GDF9O60383 454 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 STC2O76061 302 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 KLF8O95600 359 aaPredicted RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 FGFR1OPO95684 399 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 ZBED1O96006 694 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 BRD2P25440 801 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 MARSP56192 900 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 MRPS21P82921 87 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 ADIGQ0VDE8 80 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 KBTBD6Q86V97 674 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 PHTF2Q8N3S3 785 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 EHBP1Q8NDI1 1231 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 CDK5RAP1Q96SZ6 601 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 BBS2Q9BXC9 721 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 INTS2Q9H0H0 1204 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 DEC1Q9P2X7 70 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 RWDD2AQ9UIY3 292 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 MMP17Q9ULZ9 603 aa23.16■■□□□ 1.3
SYNGR3-206ENST00000618464 TBC1D3BA6NDS4 549 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 PAEPP09466 180 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 DGKEP52429 567 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 Q6ZNB5 142 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 ZNF276Q8N554 614 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 TXNDC5Q8NBS9 432 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 RBBP8NLQ8NC74 664 aaPredicted RBP23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 NETO1Q8TDF5 533 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 IPO9Q96P70 1041 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 DNAJC17Q9NVM6 304 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 KIAA1257Q9ULG3 409 aa23.15■■□□□ 1.3
SYNGR3-206ENST00000618464 SLC30A4O14863 429 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 KLKB1P03952 638 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 SETSIPP0DME0 302 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 TYRP14679 529 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 TNFRSF4P43489 277 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 RGS7P49802 495 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 PM20D1Q6GTS8 502 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 ANO7Q6IWH7 933 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 LCLAT1Q6UWP7 414 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 BHLHA9Q7RTU4 235 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 CACNA2D4Q7Z3S7 1137 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 SIX6OS1Q8N1H7 587 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 IL17RCQ8NAC3 791 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 CNOT6LQ96LI5 555 aaKnown RBP23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 KREMEN1Q96MU8 473 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 ZSWIM1Q9BR11 485 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 TPSD1Q9BZJ3 242 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 MARCH2Q9P0N8 246 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 INVSQ9Y283 1065 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 RALGAPA1Q6GYQ0 2036 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 EML5Q05BV3 1969 aa23.14■■□□□ 1.29
SYNGR3-206ENST00000618464 SLC12A8A0AV02 714 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 M0QYV0 167 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 SGK1O00141 431 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 PIK3R2O00459 728 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 DCLK1O15075 740 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 CHRM1P11229 460 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 LCP1P13796 627 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 CORO1AP31146 461 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 KIR2DL1P43626 348 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 COG7P83436 770 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 CCDC6Q16204 474 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 PKDCCQ504Y2 493 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 C10orf76Q5T2E6 689 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 GRAMD4Q6IC98 578 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 TMEM92Q6UXU6 159 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 TERB1Q8NA31 727 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 MED15Q96RN5 788 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 ARRDC1-AS1Q9H2J1 176 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 CLSTN2Q9H4D0 955 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 PLK2Q9NYY3 685 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 WDR35Q9P2L0 1181 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 EBF1Q9UH73 591 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 STRIP2Q9ULQ0 834 aa23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.13■■□□□ 1.29
SYNGR3-206ENST00000618464 A0A0A0MRY4 1105 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms