RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 AS3MTQ9HBK9 375 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 SLC39A10Q9ULF5 831 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 DOLKQ9UPQ8 538 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 LEMD3Q9Y2U8 911 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PADI6Q6TGC4 694 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 AGAP3Q96P47 875 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PIF1Q9H611 641 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 LATS2Q9NRM7 1088 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 USP12O75317 370 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 ZNF37AP17032 561 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 SLC1A6P48664 564 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 MAGEE2Q8TD90 523 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 ASIC4Q96FT7 647 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 FAM25EA8MYX2 175 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 GALCP54803 685 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 RNF219Q5W0B1 726 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 TDRD1Q9BXT4 1180 aaKnown RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 MGAT4AQ9UM21 535 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 CFAP74Q9C0B2 1584 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 FAM153BP0C7A2 387 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 TRIM62Q9BVG3 475 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 FCHO1O14526 889 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 GYPCP04921 128 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 P4HBP07237 508 aaKnown RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 LSM3P62310 102 aaKnown RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 GCKRQ14397 625 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 NCKIPSDQ9NZQ3 722 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 VTI1BQ9UEU0 232 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 H3BN98 237 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 SOAT2O75908 522 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 FBLN1P23142 703 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 RIPOR1Q6ZS17 1223 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 DRAXINQ8NBI3 349 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-208ENST00000618395 BPIFB6Q8NFQ5 453 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 TMC2Q8TDI7 906 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 EEF1AKMT1Q8WVE0 214 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 DCUN1D1Q96GG9 259 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 SLC9A8Q9Y2E8 581 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 STARD13Q9Y3M8 1113 aa15.43■□□□□ 0.06
COL5A1-208ENST00000618395 M0QX08 132 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CBX6O95503 412 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CRTC3Q6UUV7 619 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 C1orf131Q8NDD1 294 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 GPAMQ9HCL2 828 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 ADD3Q9UEY8 706 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 PVALEFA0A1B0GWK0 134 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 H3BMM5 538 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 PROCP04070 461 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 TCP10Q12799 353 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 DUS1LQ6P1R4 473 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 ZBTB33Q86T24 672 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 TTC39CQ8N584 583 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 C12orf50Q8NA57 414 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 MED11Q9P086 117 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 SLC24A2Q9UI40 661 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 STK36Q9NRP7 1315 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 I3L521 148 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 BMP10O95393 424 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 NPTXRO95502 500 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 RPS2P15880 293 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CASP1P29466 404 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 NCCRP1Q6ZVX7 275 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 KLHL11Q9NVR0 708 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CROTQ9UKG9 612 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 YTHDC2Q9H6S0 1430 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 FIG4Q92562 907 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 REXO2Q9Y3B8 237 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 NOS3P29474 1203 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 ISLR2Q6UXK2 745 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 AGPAT5Q9NUQ2 364 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 ARHGEF12Q9NZN5 1544 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 KIAA0232Q92628 1395 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CHRNGP07510 517 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 FBXW8Q8N3Y1 598 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CHCHD4Q8N4Q1 142 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 RGSL1A5PLK6 1076 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 OR6B1O95007 311 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 MAPK1P28482 360 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 NME3Q13232 169 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 CBFBQ13951 182 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 PNPT1Q8TCS8 783 aaKnown RBP15.42■□□□□ 0.06
COL5A1-208ENST00000618395 Q96MT0 163 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 C7orf25Q9BPX7 421 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 FICDQ9BVA6 458 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 TBC1D10AQ9BXI6 508 aa15.42■□□□□ 0.06
COL5A1-208ENST00000618395 SSR3Q9UNL2 185 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms