RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 MAP7D3Q8IWC1 876 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 TRIM59Q8IWR1 403 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 P3H4Q92791 437 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 SEMA4DQ92854 862 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 FAM192AQ9GZU8 254 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 ACP6Q9NPH0 428 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 CFL2Q9Y281 166 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 MYO7AQ13402 2215 aa12.55□□□□□ -0.4
SRRT-216ENST00000618262 NCK2O43639 380 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TIMP1P01033 207 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ITGB3P05106 788 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ITGA4P13612 1032 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 KRT9P35527 623 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 BLVRAP53004 296 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 YARSP54577 528 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 IFT43Q96FT9 208 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 RBM18Q96H35 190 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ENPP3O14638 875 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 GNG11P61952 73 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 PDCLQ13371 301 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 CCDC14Q49A88 953 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 LACTB2Q53H82 288 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 TDRD10Q5VZ19 366 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 TUBA3EQ6PEY2 450 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 GATAD2AQ86YP4 633 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 IRGQQ8WZA9 623 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 CDKL2Q92772 493 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 HAUS1Q96CS2 278 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TOX2Q96NM4 488 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 IL20Q9NYY1 176 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PRG3Q9Y2Y8 225 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 UBE4BO95155 1302 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 B4GALT3O60512 393 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 DGKIO75912 1065 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 S100A6P06703 90 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 NCAM1P13591 858 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PPP1R2P41236 205 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 CDC42EP1Q00587 391 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 RNASELQ05823 741 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRRT-216ENST00000618262 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ALS2CLQ60I27 953 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 ZNF280BQ86YH2 543 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRRT-216ENST00000618262 SEPT8Q92599 483 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 PEX13Q92968 403 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 LSM14BQ9BX40 385 aaKnown RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
SRRT-216ENST00000618262 TIMM13Q9Y5L4 95 aaPredicted RBP12.54□□□□□ -0.4
SRRT-216ENST00000618262 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 HDAC3O15379 428 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 PRKACAP17612 351 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 CD58P19256 250 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 RAP1GAPP47736 663 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 FMO5P49326 533 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 NIPAL4Q0D2K0 466 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 FAM187BQ17R55 369 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 PLEKHG4Q58EX7 1191 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 KLC3Q6P597 504 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 B3GALT6Q96L58 329 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 MRPL9Q9BYD2 267 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 DLGAP2Q9P1A6 1054 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 NDC80O14777 642 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 HCRTO43612 131 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 PIGRP01833 764 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 MCF2P10911 925 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 MYOGP15173 224 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
SRRT-216ENST00000618262 PCK1P35558 622 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 RABGGTBP53611 331 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 MYL6P60660 151 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms