RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MATKP42679 507 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 RNASE9P60153 205 aaKnown RBP23.7■■□□□ 1.39
CBWD3-213ENST00000618217 GPC5P78333 572 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 SLC7A9P82251 487 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 FAM78AQ5JUQ0 283 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 C10orf120Q5SQS8 335 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 DNAJC24Q6P3W2 148 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 JOSD2Q8TAC2 188 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 ZSCAN18Q8TBC5 510 aaPredicted RBP23.7■■□□□ 1.39
CBWD3-213ENST00000618217 NT5C3BQ969T7 300 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 ARHGEF26Q96DR7 871 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 ASB16Q96NS5 453 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 CDK5RAP1Q96SZ6 601 aaKnown RBP23.7■■□□□ 1.39
CBWD3-213ENST00000618217 SLITRK6Q9H5Y7 841 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 EPS15L1Q9UBC2 864 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 INTUQ9ULD6 942 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 PCDHA13Q9Y5I0 950 aa23.7■■□□□ 1.39
CBWD3-213ENST00000618217 ARHGAP6O43182 974 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 TMEM253P0C7T8 217 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 GBP2P32456 591 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 MAGEA1P43355 309 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 RPL7AP62424 266 aaKnown RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 ZXDBP98169 803 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 SPA17Q15506 151 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 ARID3BQ8IVW6 561 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 ATXN2LQ8WWM7 1075 aaKnown RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 ZFRQ96KR1 1074 aaKnown RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 DDX23Q9BUQ8 820 aaKnown RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 TRPV4Q9HBA0 871 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 OLA1Q9NTK5 396 aaKnown RBP23.7■■□□□ 1.38
CBWD3-213ENST00000618217 DNMT3LQ9UJW3 386 aa23.7■■□□□ 1.38
CBWD3-213ENST00000618217 C2CD4BA6NLJ0 364 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 MDM4O15151 490 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 PRAMEF12O95522 483 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 NOS2P35228 1153 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 PITX1P78337 314 aaPredicted RBP23.69■■□□□ 1.38
CBWD3-213ENST00000618217 DCAF6Q58WW2 860 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 RSRC2Q7L4I2 434 aaKnown RBP23.69■■□□□ 1.38
CBWD3-213ENST00000618217 TADA2BQ86TJ2 420 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 EMC1Q8N766 993 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 DQX1Q8TE96 717 aaKnown RBP23.69■■□□□ 1.38
CBWD3-213ENST00000618217 SMARCD2Q92925 531 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 SELENOOQ9BVL4 669 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 ADAM33Q9BZ11 813 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 KCNF1Q9H3M0 494 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.69■■□□□ 1.38
CBWD3-213ENST00000618217 MYO1AQ9UBC5 1043 aa23.69■■□□□ 1.38
CBWD3-213ENST00000618217 IGLV3-25P01717 112 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 PTMAP06454 111 aaKnown RBP23.68■■□□□ 1.38
CBWD3-213ENST00000618217 CKMP06732 381 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 FCARP24071 287 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 EIF4EBP2Q13542 120 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-213ENST00000618217 ACRBPQ8NEB7 543 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 RNF139Q8WU17 664 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 USP13Q92995 863 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-213ENST00000618217 NPY6RQ99463 290 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 KLF16Q9BXK1 252 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-213ENST00000618217 SMG9Q9H0W8 520 aaKnown RBP23.68■■□□□ 1.38
CBWD3-213ENST00000618217 SMOC2Q9H3U7 446 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 MARCH2Q9P0N8 246 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 ARHGAP26Q9UNA1 814 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 CCL26Q9Y258 94 aa23.68■■□□□ 1.38
CBWD3-213ENST00000618217 TMEM191CA6NGB0 347 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 C2CD4DB7Z1M9 353 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 CAPN9O14815 690 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 AVPR1AP37288 418 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 EFEMP1Q12805 493 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 OTUD1Q5VV17 481 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-213ENST00000618217 ADAMTS19Q8TE59 1207 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 CTNNBL1Q8WYA6 563 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-213ENST00000618217 ACSF2Q96CM8 615 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-213ENST00000618217 MCEEQ96PE7 176 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 TDP1Q9NUW8 608 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 SFMBT1Q9UHJ3 866 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 SCINQ9Y6U3 715 aa23.67■■□□□ 1.38
CBWD3-213ENST00000618217 RCCD1A6NED2 376 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 MBL2P11226 248 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-213ENST00000618217 BMP1P13497 986 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 SP100P23497 879 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-213ENST00000618217 BNIPLQ7Z465 357 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 RXFP2Q8WXD0 754 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 RSPRY1Q96DX4 576 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 DESI2Q9BSY9 194 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TRIM7Q9C029 511 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 MRPL47Q9HD33 250 aaKnown RBP23.66■■□□□ 1.38
CBWD3-213ENST00000618217 RRN3Q9NYV6 651 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TFR2Q9UP52 801 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 NR2E1Q9Y466 385 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 CPQQ9Y646 472 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 ANHXE9PGG2 379 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 PDGFRAP16234 1089 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TFE3P19532 575 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-213ENST00000618217 OGDHQ02218 1023 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TCEAL1Q15170 157 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 SLC25A52Q3SY17 297 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TAC4Q86UU9 113 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 MIB1Q86YT6 1006 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 ZDHHC14Q8IZN3 488 aa23.66■■□□□ 1.38
CBWD3-213ENST00000618217 TDRD5Q8NAT2 981 aaKnown RBP23.66■■□□□ 1.38
CBWD3-213ENST00000618217 RPGRIP1Q96KN7 1286 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms