RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 TDRD12Q587J7 1177 aaKnown RBP17.97■□□□□ 0.47
SBDS-205ENST00000617799 KLHDC10Q6PID8 442 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 TOGARAM2Q6ZUX3 1019 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 FAM183BPQ6ZVS7 135 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 SLC2A4RGQ9NR83 387 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 CA14Q9ULX7 337 aa17.97■□□□□ 0.47
SBDS-205ENST00000617799 HMBSP08397 361 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 NCAM1P13591 858 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 TNFAIP3P21580 790 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 NSFP46459 744 aaKnown RBP17.96■□□□□ 0.47
SBDS-205ENST00000617799 SIGLEC14Q08ET2 396 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
SBDS-205ENST00000617799 CCDC112Q8NEF3 446 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 RIN3Q8TB24 985 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 C18orf8Q96DM3 657 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 EPHX3Q9H6B9 360 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 HAUS4Q9H6D7 363 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 DUS2Q9NX74 493 aaKnown RBP17.96■□□□□ 0.47
SBDS-205ENST00000617799 WNT6Q9Y6F9 365 aa17.96■□□□□ 0.47
SBDS-205ENST00000617799 SKILP12757 684 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 TCF3P15923 654 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 YWHAZP63104 245 aaKnown RBP17.95■□□□□ 0.46
SBDS-205ENST00000617799 ZXDBP98169 803 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 CLEC16AQ2KHT3 1053 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 C2CD6Q53TS8 623 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 EFHC1Q5JVL4 640 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 MMS22LQ6ZRQ5 1243 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 TRIM67Q6ZTA4 783 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 ZNF276Q8N554 614 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 SLC30A5Q8TAD4 765 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 TTC8Q8TAM2 541 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 DNASE1L2Q92874 299 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
SBDS-205ENST00000617799 PCDHB18PQ96TA0 734 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 KLF16Q9BXK1 252 aaPredicted RBP17.95■□□□□ 0.46
SBDS-205ENST00000617799 DEF6Q9H4E7 631 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 ARHGEF3Q9NR81 526 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 LSM7Q9UK45 103 aaKnown RBP17.95■□□□□ 0.46
SBDS-205ENST00000617799 TICRRQ7Z2Z1 1910 aa17.95■□□□□ 0.46
SBDS-205ENST00000617799 SLC12A8A0AV02 714 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 E2F8A0AVK6 867 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 GOLGA8SH3BPF8 625 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 SLC9A3R1O14745 358 aaPredicted RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 HSF2BPO75031 334 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 GRAP2O75791 330 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 CYP1A1P04798 512 aaPredicted RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 GZMAP12544 262 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 KPNA1P52294 538 aaPredicted RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 COG7P83436 770 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 SLC6A3Q01959 620 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 PDGFRLQ15198 375 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 FAM102AQ5T9C2 384 aaPredicted RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 TRIM68Q6AZZ1 485 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 ZDHHC17Q8IUH5 632 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 CCDC170Q8IYT3 715 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 SIX5Q8N196 739 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 TC2NQ8N9U0 490 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 OSCP1Q8WVF1 389 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 PIWIL1Q96J94 861 aaKnown RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 C11orf70Q9BRQ4 267 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 MFSD1Q9H3U5 465 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 EBF3Q9H4W6 596 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 POPDC2Q9HBU9 364 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 LUC7LQ9NQ29 371 aaKnown RBP17.94■□□□□ 0.46
SBDS-205ENST00000617799 WNT16Q9UBV4 365 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 SFMBT1Q9UHJ3 866 aa17.94■□□□□ 0.46
SBDS-205ENST00000617799 KIF26AQ9ULI4 1882 aaPredicted RBP17.93■□□□□ 0.46
SBDS-205ENST00000617799 TMEM221A6NGB7 291 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 M0R296 226 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 STK25O00506 426 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 MSI1O43347 362 aaKnown RBP17.93■□□□□ 0.46
SBDS-205ENST00000617799 IPO7O95373 1038 aaKnown RBP17.93■□□□□ 0.46
SBDS-205ENST00000617799 ARSAP15289 507 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 FECHP22830 423 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 ADKP55263 362 aaKnown RBP17.93■□□□□ 0.46
SBDS-205ENST00000617799 RNASE9P60153 205 aaKnown RBP17.93■□□□□ 0.46
SBDS-205ENST00000617799 TNK2Q07912 1038 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 CCDC173Q0VFZ6 552 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 TAF5Q15542 800 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 OLFML1Q6UWY5 402 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 CPA6Q8N4T0 437 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 ATP2A3Q93084 1043 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 TRIM11Q96F44 468 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 ASIC4Q96FT7 647 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 VCPIP1Q96JH7 1222 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 CCDC42Q96M95 316 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 HEBP1Q9NRV9 189 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 TMEM51Q9NW97 253 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 GTSE1Q9NYZ3 720 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 NAALADL1Q9UQQ1 740 aa17.93■□□□□ 0.46
SBDS-205ENST00000617799 FAM86C2PA6NEL3 165 aa17.92■□□□□ 0.46
SBDS-205ENST00000617799 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
SBDS-205ENST00000617799 NFATC1O95644 943 aa17.92■□□□□ 0.46
SBDS-205ENST00000617799 GLI1P08151 1106 aa17.92■□□□□ 0.46
SBDS-205ENST00000617799 UNGP13051 313 aaPredicted RBP17.92■□□□□ 0.46
SBDS-205ENST00000617799 MMP8P22894 467 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms