RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	ZNF7	P17097	686 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	POLR2E	P19388	210 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	FGFR2	P21802	821 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TFDP3	Q5H9I0	405 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	METTL3	Q86U44	580 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	C4orf19	Q8IY42	314 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CAMKK1	Q8N5S9	505 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	OLFM1	Q99784	485 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PALMD	Q9NP74	551 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ITSN1	Q15811	1721 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271		E9PBE3	544 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	WWP2	O00308	870 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ATP6V1C1	P21283	382 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	DNAJB2	P25686	324 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PMS1	P54277	932 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	FKBP1A	P62942	108 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SMTNL2	Q2TAL5	461 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CES5A	Q6NT32	575 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	NIPA1	Q7RTP0	329 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	C4orf33	Q8N1A6	199 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TMEM86A	Q8N2M4	240 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CPB2	Q96IY4	423 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PNKP	Q96T60	521 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SYT15	Q9BQS2	421 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLITRK2	Q9H156	845 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	HMX1	Q9NP08	348 aa	Predicted RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	FBXO10	Q9UK96	956 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	MROH7	Q68CQ1	1323 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	HACD1	B0YJ81	288 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CPSF4	O95639	269 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	DSG3	P32926	999 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CYP24A1	Q07973	514 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACOX1	Q15067	660 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	GALNTL6	Q49A17	601 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CYP20A1	Q6UW02	462 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ACOT1	Q86TX2	421 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	MIB1	Q86YT6	1006 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	POMGNT2	Q8NAT1	580 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	USP38	Q8NB14	1042 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF473	Q8WTR7	871 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	LRRC1	Q9BTT6	524 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	IL1RAPL1	Q9NZN1	696 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	RGL2	O15211	777 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	WBP4	O75554	376 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ATP5B	P06576	529 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	RFX3	P48380	749 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	VSNL1	P62760	191 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	C1D	Q13901	141 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PABPC1L	Q4VXU2	614 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ATP6AP1L	Q52LC2	224 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PAGE2B	Q5JRK9	111 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	FBXO47	Q5MNV8	452 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	OVOS1	Q6IE37	1185 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRMT11	Q7Z4G4	463 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	DEFB128	Q7Z7B8	93 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TXNRD3	Q86VQ6	643 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	LPCAT1	Q8NF37	534 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	KCNB2	Q92953	911 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	HTATIP2	Q9BUP3	242 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRIM8	Q9BZR9	551 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	MTMR12	Q9C0I1	747 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	COMMD8	Q9NX08	183 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ADAM21	Q9UKJ8	722 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRHDE	Q9UKU6	1024 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ADGRA3	Q8IWK6	1321 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PDZK1P1	A8MUH7	402 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SNAP23	O00161	211 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SUPT7L	O94864	414 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	NPY2R	P49146	381 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	INHBE	P58166	350 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	NFYC	Q13952	458 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	IKBKE	Q14164	716 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PTGIS	Q16647	500 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	GRTP1	Q5TC63	336 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	LYPLAL1	Q5VWZ2	237 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SRL	Q86TD4	932 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	IFNE	Q86WN2	208 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CXorf40A	Q8TE69	158 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	UBE2E3	Q969T4	207 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ASB2	Q96Q27	587 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	ERP44	Q9BS26	406 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	XPNPEP3	Q9NQH7	507 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TRIM49D1	C9J1S8	452 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CBX4	O00257	560 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PPP1R37	O75864	691 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CCND1	P24385	295 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SERPINB1	P30740	379 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PSEN2	P49810	448 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	PEX5	P50542	639 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	TKTL1	P51854	596 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	GRIK3	Q13003	919 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	DDX39B	Q13838	428 aa	Known RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	NR1I3	Q14994	352 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	CCDC92	Q53HC0	331 aa	Predicted RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SPANXN3	Q5MJ09	141 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLC27A1	Q6PCB7	646 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM83A	Q86UY5	434 aa		7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	SLC13A5	Q86YT5	568 aa	Predicted RBP	7.57	□□□□□ -1.2
PCDH15-231	ENST00000617271	STK40	Q8N2I9	435 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms