RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 EMC1Q8N766 993 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 JOSD2Q8TAC2 188 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 ZSCAN18Q8TBC5 510 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 CTNNBL1Q8WYA6 563 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 ARHGEF26Q96DR7 871 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 OLA1Q9NTK5 396 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 PATJQ8NI35 1801 aa16.33■□□□□ 0.2
PCDHGC3-204ENST00000617222 OLFM2O95897 454 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 CKMP06732 381 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 TMEM253P0C7T8 217 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 NOS2P35228 1153 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 RFC1P35251 1148 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 FLT3P36888 993 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 RPL7AP62424 266 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 FAM78AQ5JUQ0 283 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 PPP1R15BQ5SWA1 713 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 C2orf16Q68DN1 1984 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 TRNP1Q6NT89 227 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 KLHDC10Q6PID8 442 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 DQX1Q8TE96 717 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 MCEEQ96PE7 176 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 DESI2Q9BSY9 194 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 DDX23Q9BUQ8 820 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 LUC7LQ9NQ29 371 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 SMPD4Q9NXE4 827 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 MARCH2Q9P0N8 246 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 SFMBT1Q9UHJ3 866 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 INTUQ9ULD6 942 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 USTQ9Y2C2 406 aa16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-204ENST00000617222 C2CD4BA6NLJ0 364 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 C2CD4DB7Z1M9 353 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 PDGFRAP16234 1089 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 MATKP42679 507 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 PITX1P78337 314 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 KRT83P78385 493 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 SLC7A9P82251 487 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 MSANTD2Q6P1R3 559 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 ARCQ7LC44 396 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 MIB1Q86YT6 1006 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 TDRD5Q8NAT2 981 aaKnown RBP16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 ADAM32Q8TC27 787 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 SMARCD2Q92925 531 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 NUP85Q9BW27 656 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 GKN1Q9NS71 199 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 CTTNBP2NLQ9P2B4 639 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 CPQQ9Y646 472 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
PCDHGC3-204ENST00000617222 ZNF638Q14966 1978 aaKnown RBP16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 SLC12A8A0AV02 714 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 TMEM191CA6NGB0 347 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 PRAMEF12O95522 483 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 HMBSP08397 361 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 GPD1P21695 349 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 WEE1P30291 646 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 VIPR2P41587 438 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 SULT1E1P49888 294 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 TAC4Q86UU9 113 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 TTC16Q8NEE8 873 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 CFAP57Q96MR6 1250 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 NPY6RQ99463 290 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 KLF16Q9BXK1 252 aaPredicted RBP16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 SMOC2Q9H3U7 446 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 EPS15L1Q9UBC2 864 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 ARHGAP26Q9UNA1 814 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
PCDHGC3-204ENST00000617222 SYNJ2BP-COX16A0A087WUM0 186 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 M0QYT0 321 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 DPYSL4O14531 572 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 MSI1O43347 362 aaKnown RBP16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 IRF1P10914 325 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 TFE3P19532 575 aaPredicted RBP16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 SDC4P31431 198 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 VAV2P52735 878 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 ZXDBP98169 803 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 OGDHQ02218 1023 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 TANGO2Q6ICL3 276 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 PARM1Q6UWI2 310 aa16.29■□□□□ 0.2
PCDHGC3-204ENST00000617222 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms