RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NFS1Q9Y697 457 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 REV3LO60673 3130 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TCRBV7S3A2A0A539 114 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAM72CH0Y354 149 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 RBP3P10745 1247 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 AMPD1P23109 780 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 GRIK1P39086 918 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 MATKP42679 507 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 VCPP55072 806 aaKnown RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 EIF3EP60228 445 aaKnown RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 TLE2Q04725 743 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SLC10A2Q12908 348 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 NNTQ13423 1086 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 OASLQ15646 514 aaKnown RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 KYNUQ16719 465 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ANKRD20A8PQ5CZ79 823 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ERMARDQ5T6L9 678 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAM72AQ5TYM5 149 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 OTUD1Q5VV17 481 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAM72DQ6L9T8 149 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 DCLRE1AQ6PJP8 1040 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAM72BQ86X60 149 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 METTL23Q86XA0 190 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TMEM86AQ8N2M4 240 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PQLC3Q8N755 202 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 MAIP1Q8WWC4 291 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SNF8Q96H20 258 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 C9orf72Q96LT7 481 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TSPAN18Q96SJ8 248 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ADAM7Q9H2U9 754 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 NRDE2Q9H7Z3 1164 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 MTMR10Q9NXD2 777 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 CDH9Q9ULB4 789 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 AP4E1Q9UPM8 1137 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ATP11BQ9Y2G3 1177 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 GOLGA6CA6NDK9 693 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 HHLA1C9JL84 531 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 GOLGA6DP0CG33 693 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 NDUFV2P19404 249 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 L1CAMP32004 1257 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 HPDP32754 393 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 GBE1Q04446 702 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 PTK6Q13882 451 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FASTKD3Q14CZ7 662 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 ARHGEF6Q15052 776 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 INTS6LQ5JSJ4 861 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAXCQ5TGI0 409 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM171A1Q5VUB5 890 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 DARS2Q6PI48 645 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 ALLCQ8N6M5 410 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 PLD5Q8N7P1 536 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ATAD1Q8NBU5 361 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM71BQ8TC56 605 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 P3H4Q92791 437 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM161BQ96MY7 647 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 RNF157Q96PX1 679 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 CEP41Q9BYV8 373 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 GOLGA6AQ9NYA3 693 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 TBKBP1A7MCY6 615 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 H7C0C1 242 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 M0QZQ0 153 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 CSPG5O95196 566 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 EOMESO95936 686 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 PCSK1P29120 753 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ACADSBP45954 432 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ATP5OP48047 213 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 LMAN1P49257 510 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 DRG2P55039 364 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 COPS2P61201 443 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM189BP81408 668 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 IFFO1Q0D2I5 559 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 PLEKHG4Q58EX7 1191 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 EFHC1Q5JVL4 640 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ANKRD22Q5VYY1 191 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ALS2CLQ60I27 953 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SLC35B2Q8TB61 432 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 RSAD2Q8WXG1 361 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 LRRC45Q96CN5 670 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ACBD6Q9BR61 282 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 TXLNGYQ9BZA5 131 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM124BQ9H5Z6 455 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 MYO18AQ92614 2054 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 ERICH4A6NGS2 130 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 C2CD2LO14523 706 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 PPFIA2O75334 1257 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ZBED1O96006 694 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 RPLP2P05387 115 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 ITGB8P26012 769 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 RPL34P49207 117 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 DAOAP59103 153 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms