RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OLFM3Q96PB7 478 aa13□□□□□ -0.33
TCF4-248ENST00000616053 STX11O75558 287 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ITGB6P18564 788 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ALAS2P22557 587 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 EPHX2P34913 555 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 SERPINA13PQ6UXR4 307 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 KCNA5P22460 613 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 LDHDQ86WU2 507 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 NCDNQ9UBB6 729 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 SLC28A2O43868 658 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 HSPA9P38646 679 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 LCORLQ8N3X6 602 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ANKFN1Q8N957 763 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ATG16L2Q8NAA4 619 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 SETD6Q8TBK2 473 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 UBP1Q9NZI7 540 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 SEPT3Q9UH03 358 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 MRTO4Q9UKD2 239 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 GMFGO60234 142 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 ITIH2P19823 946 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 DNASE1L1P49184 302 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 MYBPC2Q14324 1141 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 RETSATQ6NUM9 610 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 FAM81AQ8TBF8 368 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 CMTM5Q96DZ9 223 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 C5orf34Q96MH7 638 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 TTC34A8MYJ7 566 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 F5H6K3 240 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 DGKIO75912 1065 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 RAB25P57735 213 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 KLRC3Q07444 240 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 NCOA4Q13772 614 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 BAATQ14032 418 aaPredicted RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 LIN54Q6MZP7 749 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 GALNT4Q8N4A0 578 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 MRPL17Q9NRX2 175 aaKnown RBP12.99□□□□□ -0.33
TCF4-248ENST00000616053 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 RWDD2AQ9UIY3 292 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 A0A0B4J269 797 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 TUBB3Q13509 450 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 TERF2Q15554 542 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 LIX1Q8N485 282 aa12.99□□□□□ -0.33
TCF4-248ENST00000616053 IGSF6O95976 241 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 GPR15P49685 360 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 ATXN1P54253 815 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 GEMP55040 296 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 RGS1Q08116 209 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 MAGEE2Q8TD90 523 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 DSN1Q9H410 356 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 PRMT7Q9NVM4 692 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 DNAAF1Q8NEP3 725 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 DBIP07108 87 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 OR56A5P0C7T3 313 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 CCNE1P24864 410 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 TRAP1Q12931 704 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 KBTBD12Q3ZCT8 623 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 GLRA4Q5JXX5 417 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 RSBN1Q5VWQ0 802 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 EXOC3L1Q86VI1 746 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 TRIM24O15164 1050 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 TOP3BO95985 862 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 DNTTP04053 509 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 ITGA8P53708 1063 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 PRKAG1P54619 331 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 PER3P56645 1201 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 RGS8P57771 180 aaPredicted RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 OR52L1Q8NGH7 329 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 EPB41L4BQ9H329 900 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 BPNT1O95861 308 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 OLFML2BQ68BL8 750 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 UBA3Q8TBC4 463 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 ARHGEF26Q96DR7 871 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 TMEM68Q96MH6 324 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 MYOCQ99972 504 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 WNT8AQ9H1J5 351 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 WHRNQ9P202 907 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 A0A087WWV3 80 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms