RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CEP78Q5JTW2 689 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 FAM209BQ5JX69 171 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 IZUMO3Q5VZ72 239 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 VSTM1Q6UX27 236 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 TXLNBQ8N3L3 684 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 ZNF398Q8TD17 642 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 KAZALD1Q96I82 304 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 HS6ST2Q96MM7 605 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 GJB4Q9NTQ9 266 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 MAN2B2Q9Y2E5 1009 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 ZNF804BA4D1E1 1349 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 INO80B-WBP1J3KQ70 363 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 PRR35P0CG20 571 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 HARSP12081 509 aaKnown RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 ATF7P17544 494 aaPredicted RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 KELP23276 732 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 MPGP29372 298 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 GPC5P78333 572 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 KRTAP1-1Q07627 177 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 DNASE1L3Q13609 305 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 KCNB1Q14721 858 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 AASDHQ4L235 1098 aaPredicted RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 IL31Q6EBC2 164 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 YTHDF3Q7Z739 585 aaKnown RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 PNISRQ8TF01 805 aaKnown RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 HIC2Q96JB3 615 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 CCDC138Q96M89 665 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 CINPQ9BW66 212 aaPredicted RBP5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 PCDHAC1Q9H158 963 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 NRIP3Q9NQ35 241 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 RXFP3Q9NSD7 469 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 RGL1Q9NZL6 768 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 FZD4Q9ULV1 537 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 MAFFQ9ULX9 164 aa5.91□□□□□ -1.46
SCAMP1-205ENST00000614488 COL3A1P02461 1466 aaPredicted RBP5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 RNF8O76064 485 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 ATP1A4Q13733 1029 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 KCNJ12Q14500 433 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 MORN5Q5VZ52 161 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 GRHL2Q6ISB3 625 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 SLC18B1Q6NT16 456 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 TLDC1Q6P9B6 456 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 P3H2Q8IVL5 708 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 PARD3BQ8TEW8 1205 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 MYD88Q99836 296 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 USP29Q9HBJ7 922 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 TMEM8AQ9HCN3 771 aa5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 ZNF70Q9UC06 446 aaPredicted RBP5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 ZMYND8Q9ULU4 1186 aaPredicted RBP5.9□□□□□ -1.46
SCAMP1-205ENST00000614488 WDR17Q8IZU2 1322 aa5.9□□□□□ -1.47
SCAMP1-205ENST00000614488 HNRNPDLO14979 420 aaKnown RBP5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 CA12O43570 354 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 NDST3O95803 873 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 EEF1GP26641 437 aaKnown RBP5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 PBX1P40424 430 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 NEK3P51956 506 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 NSUN2Q08J23 767 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 MFSD13AQ14CX5 517 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 MAPKAPK3Q16644 382 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 MTX3Q5HYI7 312 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 RAP1GAP2Q684P5 730 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF626Q68DY1 528 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 MIS18BP1Q6P0N0 1132 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 FAM71DQ8N9W8 422 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 DEPTORQ8TB45 409 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF566Q969W8 418 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 TNIP3Q96KP6 325 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 FAM118BQ9BPY3 351 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 EFHD1Q9BUP0 239 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 C1QTNF7Q9BXJ2 289 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 QTRT1Q9BXR0 403 aaKnown RBP5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 CERS4Q9HA82 394 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 NECTIN3Q9NQS3 549 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 PDGFCQ9NRA1 345 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 VPS45Q9NRW7 570 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 TM7SF3Q9NS93 570 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 SEMA5BQ9P283 1151 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 CA14Q9ULX7 337 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 SCAF8Q9UPN6 1271 aaKnown RBP5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 SPATA31A1Q5TZJ5 1347 aa5.89□□□□□ -1.47
SCAMP1-205ENST00000614488 CYP2D7A0A087X1C5 515 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 FAM234BA2RU67 622 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 CLIC1O00299 241 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 PLIN1O60240 522 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 PRAMEF2O60811 474 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 BCAR3O75815 825 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 TMIGD3P0DMS9 266 aaPredicted RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF268Q14587 947 aaPredicted RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 DGKKQ5KSL6 1271 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 MEX3CQ5U5Q3 659 aaKnown RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 FAM90A2PQ658T7 463 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 ARL6IP4Q66PJ3 421 aaKnown RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 FBXO38Q6PIJ6 1188 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 RANBP10Q6VN20 620 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 C1QL2Q7Z5L3 287 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 GLIS1Q8NBF1 620 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms