RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 LRMPQ12912 555 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 PLK5Q496M5 336 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 USP39Q53GS9 565 aaKnown RBP23.88■■□□□ 1.41
FAM228B-208ENST00000613899 ANO7Q6IWH7 933 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 TRMT11Q7Z4G4 463 aaKnown RBP23.88■■□□□ 1.41
FAM228B-208ENST00000613899 TTC30AQ86WT1 665 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 MIB1Q86YT6 1006 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 KCNV2Q8TDN2 545 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 NT5C1BQ96P26 610 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 RTKNQ9BST9 563 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 BBS2Q9BXC9 721 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 WDR35Q9P2L0 1181 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 CTNND2Q9UQB3 1225 aa23.88■■□□□ 1.41
FAM228B-208ENST00000613899 ANTXRLA6NF34 631 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 PPP1R3GB7ZBB8 358 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 NEDD8-MDP1E9PL57 170 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 XPO1O14980 1071 aaKnown RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 P4HA2O15460 535 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 CACNG3O60359 315 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 GADD45BO75293 160 aaPredicted RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 STC2O76061 302 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 RHOBTB1O94844 696 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 CHRM1P11229 460 aaPredicted RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 BMP6P22004 513 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 COG7P83436 770 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 BST2Q10589 180 aaKnown RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 GRAMD4Q6IC98 578 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 Q6ZNB5 142 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 UBR7Q8N806 425 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 TPSD1Q9BZJ3 242 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 ARRDC1-AS1Q9H2J1 176 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 POLMQ9NP87 494 aaPredicted RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 DNAJC17Q9NVM6 304 aaKnown RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 RASAL2Q9UJF2 1139 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 KIAA1257Q9ULG3 409 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 ZNF510Q9Y2H8 683 aa23.87■■□□□ 1.41
FAM228B-208ENST00000613899 MYO18AQ92614 2054 aaKnown RBP23.87■■□□□ 1.41
FAM228B-208ENST00000613899 SGK1O00141 431 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 BIN1O00499 593 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 GNA14O95837 355 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 VDRP11473 427 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 TYRP14679 529 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 TKTL1P51854 596 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 ATXN1P54253 815 aaKnown RBP23.86■■□□□ 1.41
FAM228B-208ENST00000613899 PDE4CQ08493 712 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 PAK1Q13153 545 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 C10orf76Q5T2E6 689 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 TMEM92Q6UXU6 159 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 TPGS1Q6ZTW0 290 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 RSRC2Q7L4I2 434 aaKnown RBP23.86■■□□□ 1.41
FAM228B-208ENST00000613899 ZNF513Q8N8E2 541 aaPredicted RBP23.86■■□□□ 1.41
FAM228B-208ENST00000613899 MDGA1Q8NFP4 955 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 DUSP15Q9H1R2 295 aaPredicted RBP23.86■■□□□ 1.41
FAM228B-208ENST00000613899 LRRC4Q9HBW1 653 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 STRIP2Q9ULQ0 834 aa23.86■■□□□ 1.41
FAM228B-208ENST00000613899 ZBED1O96006 694 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 PAEPP09466 180 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 SETSIPP0DME0 302 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 YWHAGP61981 247 aaKnown RBP eCLIP23.85■■□□□ 1.41
FAM228B-208ENST00000613899 EFEMP1Q12805 493 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 EMC10Q5UCC4 262 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 PM20D1Q6GTS8 502 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 PPM1KQ8N3J5 372 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 TRIML1Q8N9V2 468 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 C12orf50Q8NA57 414 aaPredicted RBP23.85■■□□□ 1.41
FAM228B-208ENST00000613899 DCLK3Q9C098 648 aa23.85■■□□□ 1.41
FAM228B-208ENST00000613899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.84■■□□□ 1.41
FAM228B-208ENST00000613899 DCLK1O15075 740 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 ZNF806P0C7X5 589 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 GBP1P32455 592 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 MPLP40238 635 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 TMEM270Q6UE05 265 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 IPO9Q96P70 1041 aaKnown RBP23.84■■□□□ 1.41
FAM228B-208ENST00000613899 ULBP1Q9BZM6 244 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 OLA1Q9NTK5 396 aaKnown RBP23.84■■□□□ 1.41
FAM228B-208ENST00000613899 MARCH2Q9P0N8 246 aa23.84■■□□□ 1.41
FAM228B-208ENST00000613899 O00370 1275 aa23.83■■□□□ 1.41
FAM228B-208ENST00000613899 HNRNPLP14866 589 aaKnown RBP eCLIP23.83■■□□□ 1.41
FAM228B-208ENST00000613899 CHKAP35790 457 aa23.83■■□□□ 1.41
FAM228B-208ENST00000613899 MARSP56192 900 aaKnown RBP23.83■■□□□ 1.41
FAM228B-208ENST00000613899 ADIGQ0VDE8 80 aa23.83■■□□□ 1.41
FAM228B-208ENST00000613899 AASDHQ4L235 1098 aaPredicted RBP23.83■■□□□ 1.41
FAM228B-208ENST00000613899 BCCIPQ9P287 314 aaKnown RBP eCLIP23.83■■□□□ 1.41
FAM228B-208ENST00000613899 STARD13Q9Y3M8 1113 aa23.83■■□□□ 1.41
FAM228B-208ENST00000613899 PCDHB4Q9Y5E5 795 aa23.83■■□□□ 1.41
FAM228B-208ENST00000613899 PLXND1Q9Y4D7 1925 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 TULP2O00295 520 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 SLC30A4O14863 429 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 ADAM23O75077 832 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 FGFR1OPO95684 399 aaKnown RBP23.82■■□□□ 1.4
FAM228B-208ENST00000613899 CORO1AP31146 461 aaKnown RBP23.82■■□□□ 1.4
FAM228B-208ENST00000613899 DGKGP49619 791 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 STX17P56962 302 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 UBE2HP62256 183 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 STILQ15468 1287 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 PLA2G2CQ5R387 149 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 PMS2CLQ68D20 193 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 TRIM59Q8IWR1 403 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 SIX6OS1Q8N1H7 587 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 KCTD13Q8WZ19 329 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms