RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SLC25A52Q3SY17 297 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 SLC39A12Q504Y0 691 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 KAZNQ674X7 775 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TTC27Q6P3X3 843 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 FUT10Q6P4F1 479 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 CYP4V2Q6ZWL3 525 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 STRADAQ7RTN6 431 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 HDXQ7Z353 690 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 CEP57Q86XR8 500 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 MAP7D3Q8IWC1 876 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 DEFB106AQ8N104 65 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 ATL2Q8NHH9 583 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TEKT4Q8WW24 435 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 C1orf54Q8WWF1 131 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 IFT81Q8WYA0 676 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 NDRG1Q92597 394 aaKnown RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 SLCO2A1Q92959 643 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TOP1MTQ969P6 601 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 NT5C3BQ969T7 300 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TRIM43Q96BQ3 446 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 ACSF2Q96CM8 615 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 SLC2A13Q96QE2 648 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 PEBP4Q96S96 227 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 OXCT2Q9BYC2 517 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 GPR62Q9BZJ7 368 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 POPDC2Q9HBU9 364 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 MARCH5Q9NX47 278 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 STAP1Q9ULZ2 295 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 VWA8A3KMH1 1905 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 ESYT3A0FGR9 886 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ZSCAN5CA6NGD5 496 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 H7C4K7 107 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 MDM4O15151 490 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ENDOD1O94919 500 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 AMHP03971 560 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RAG1P15918 1043 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CARSP49589 748 aaKnown RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 EPHB4P54760 987 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 DRG2P55039 364 aaKnown RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 BCAR1P56945 870 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ADCY2Q08462 1091 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CTXN3Q4LDR2 81 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RAB6CQ53S08 254 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 DCAF6Q58WW2 860 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ERMARDQ5T6L9 678 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 PM20D1Q6GTS8 502 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ZNF280DQ6N043 979 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 MFSD5Q6N075 450 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 EMBQ6PCB8 327 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 VSTM1Q6UX27 236 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 SYDE1Q6ZW31 735 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 GPRIN1Q7Z2K8 1008 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TMEM199Q8N511 208 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 AENQ8WTP8 325 aaKnown RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 GRK7Q8WTQ7 553 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 IRGQQ8WZA9 623 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 HSPH1Q92598 858 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ERP44Q9BS26 406 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 FUT8Q9BYC5 575 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RHOBTB2Q9BYZ6 727 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RAB6CQ9H0N0 254 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 PRDM5Q9NQX1 630 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RRN3Q9NYV6 651 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 R3HDM2Q9Y2K5 976 aaKnown RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 NLRC5Q86WI3 1866 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 YJEFN3A6XGL0 299 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 NT5C1B-RDH14C9J2C7 533 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 E7ENQ6 273 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CAPN9O14815 690 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ECEL1O95672 775 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 LTFP02788 710 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CD48P09326 243 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 OR4Q2P0C623 313 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CSF2RAP15509 400 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CYP2F1P24903 491 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ITGB8P26012 769 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 GMPRP36959 345 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 GRIK1P39086 918 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 KCNJ1P48048 391 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 SULT1E1P49888 294 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ARSEP51690 589 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 RABGGTBP53611 331 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 CDH6P55285 790 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 LMNB2Q03252 620 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 SMARCB1Q12824 385 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 SNX1Q13596 522 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 KRT81Q14533 505 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TRADDQ15628 312 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 DUPD1Q68J44 220 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 DRICH1Q6PGQ1 229 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms