RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ZFRQ96KR1 1074 aaKnown RBP12.92□□□□□ -0.34
CBWD3-208ENST00000612050 KREMEN1Q96MU8 473 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 BBS2Q9BXC9 721 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 ARHGEF4Q9NR80 690 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 NUDT5Q9UKK9 219 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
CBWD3-208ENST00000612050 SLC12A8A0AV02 714 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 CHURC1-FNTBB4DL54 471 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 CAPN9O14815 690 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 HMBSP08397 361 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 PON1P27169 355 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 KRT9P35527 623 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 GRIA2P42262 883 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 RGS7P49802 495 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 ZNF445P59923 1031 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 MRPS21P82921 87 aaKnown RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 SATB1Q01826 763 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 RAPGEF1Q13905 1077 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 HSF5Q4G112 596 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 BSPRYQ5W0U4 402 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 SDE2Q6IQ49 451 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 SCD5Q86SK9 330 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 MAML2Q8IZL2 1156 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 CAMKK1Q8N5S9 505 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 TFAP2BQ92481 460 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 PCMTD1Q96MG8 357 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 MED15Q96RN5 788 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 OSER1Q9NX31 292 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 GMEB2Q9UKD1 530 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 HBS1LQ9Y450 684 aaKnown RBP12.91□□□□□ -0.34
CBWD3-208ENST00000612050 F5P12259 2224 aa12.91□□□□□ -0.34
CBWD3-208ENST00000612050 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 NEDD8-MDP1E9PL57 170 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 RNF225M0QZC1 329 aaPredicted RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 MDM4O15151 490 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 STC2O76061 302 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 KAT7O95251 611 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 CORO1AP31146 461 aaKnown RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 TNFRSF4P43489 277 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 ZNF132P52740 706 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 DAOAP59103 153 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 MYL5Q02045 173 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 EOGTQ5NDL2 527 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 GRAMD4Q6IC98 578 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 RBM43Q6ZSC3 357 aaKnown RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 TPGS1Q6ZTW0 290 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 CEP68Q76N32 757 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 UNC45BQ8IWX7 931 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 ZBTB44Q8NCP5 570 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 STK32AQ8WU08 396 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 ZNF606Q8WXB4 792 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 FAM149B1Q96BN6 582 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 DDX50Q9BQ39 737 aaKnown RBP12.9□□□□□ -0.34
CBWD3-208ENST00000612050 MIS12Q9H081 205 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.34
CBWD3-208ENST00000612050 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 TULP2O00295 520 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 LTFP02788 710 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 TYRP14679 529 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 HOXA6P31267 233 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 OPRD1P41143 372 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 SEC13P55735 322 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 KDSRQ06136 332 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 NUGGCQ68CJ6 796 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
CBWD3-208ENST00000612050 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-208ENST00000612050 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 KCNV2Q8TDN2 545 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 SHC3Q92529 594 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 EDEM1Q92611 657 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 RUBCNQ92622 972 aa12.89□□□□□ -0.35
CBWD3-208ENST00000612050 POLMQ9NP87 494 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-208ENST00000612050 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
CBWD3-208ENST00000612050 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
CBWD3-208ENST00000612050 CACNA1IQ9P0X4 2223 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 YJEFN3A6XGL0 299 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 SMTNL1A8MU46 457 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 E7ENQ6 273 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 PIK3R2O00459 728 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 TULP3O75386 442 aa12.88□□□□□ -0.35
CBWD3-208ENST00000612050 APBB3O95704 486 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms