RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 STRCP1A6NGW2 1772 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 COL4A1P02462 1669 aa6.6□□□□□ -1.35
SNX13-213ENST00000611725 LOC100653049A0A140TA62 436 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 FCHO1O14526 889 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CHADO15335 359 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 KRT34O76011 436 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ZBTB48P10074 688 aaPredicted RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 SERPINB3P29508 390 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 TKTL1P51854 596 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 MGAT5Q09328 741 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BNIP1Q12981 228 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ZC3H12AQ5D1E8 599 aaKnown RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 C1orf146Q5VVC0 180 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BTBD8Q5XKL5 378 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 APBB2Q92870 758 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 FAM193BQ96PV7 902 aaPredicted RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 EPB41L4BQ9H329 900 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 PAPSS1O43252 624 aaPredicted RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 ATP6V1G2O95670 118 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 JCHAINP01591 159 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 GCKP35557 465 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 AQP5P55064 265 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BST1Q10588 318 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 MMRN1Q13201 1228 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 SEPT6Q14141 434 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 IQSEC1Q6DN90 963 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 PMF1Q6P1K2 205 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ABI1Q8IZP0 508 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 NIPA2Q8N8Q9 360 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 SYT15Q9BQS2 421 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 KATNAL1Q9BW62 490 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CEP41Q9BYV8 373 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 MYLK2Q9H1R3 596 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 VCX3BQ9H321 246 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 PRDM12Q9H4Q4 367 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BAZ2AQ9UIF9 1905 aaKnown RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 IGKV6-21A0A0C4DH24 114 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CYB561D2O14569 222 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 OPHN1O60890 802 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 AVILO75366 819 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 NRLP54845 237 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CDK16Q00536 496 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ACVR2BQ13705 512 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 SLC1A5Q15758 541 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 PPP1R26Q5T8A7 1209 aaPredicted RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 NAPEPLDQ6IQ20 393 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 DNAJB3Q8WWF6 145 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 APOL2Q9BQE5 337 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 NRDE2Q9H7Z3 1164 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BATF3Q9NR55 127 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 KCNH4Q9UQ05 1017 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 PHLPP1O60346 1717 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 C2CD2LO14523 706 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 GIPC1O14908 333 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 FBXO21O94952 628 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 OTOAQ7RTW8 1153 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 DTX3LQ8TDB6 740 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 LGMNQ99538 433 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CCDC68Q9H2F9 335 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 DONSONQ9NYP3 566 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 RNF103O00237 685 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 TXNDC9O14530 226 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 GLRA3O75311 464 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 LGR5O75473 907 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 DARSP14868 501 aaKnown RBP6.59□□□□□ -1.35
SNX13-213ENST00000611725 KLRC2P26717 231 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ZNF132P52740 706 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 BBS5Q8N3I7 341 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 FSD1LQ9BXM9 530 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 ETNK2Q9NVF9 386 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 HMGXB4Q9UGU5 601 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 CPA4Q9UI42 421 aa6.59□□□□□ -1.35
SNX13-213ENST00000611725 A0A0A0MRY4 1105 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 MGRN1O60291 552 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 APOEP02649 317 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 ENO1P06733 434 aaKnown RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 GRK2P25098 689 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 FOXN2P32314 431 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 GP5P40197 560 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 RPL10AP62906 217 aaKnown RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 ADIGQ0VDE8 80 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 DNAL1Q4LDG9 190 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 UBAP2Q5T6F2 1119 aaKnown RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 RNF43Q68DV7 783 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 RELL1Q8IUW5 271 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 ZNF398Q8TD17 642 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 TEKT4Q8WW24 435 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 WNT8BQ93098 351 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 SPATA13Q96N96 652 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 EBNA1BP2Q99848 306 aaKnown RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 FAM124BQ9H5Z6 455 aaPredicted RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 LRRC40Q9H9A6 602 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 CYP4F11Q9HBI6 524 aa6.59□□□□□ -1.36
SNX13-213ENST00000611725 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.36
SNX13-213ENST00000611725 NRCAMQ92823 1304 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TOMM70O94826 608 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 FSCBQ5H9T9 825 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms