RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KCNJ11Q14654 390 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 FAXCQ5TGI0 409 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 PAQR9Q6ZVX9 377 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 CCDC33Q8N5R6 958 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 ANKS4BQ8N8V4 417 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 FBF1Q8TES7 1133 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 KCTD15Q96SI1 283 aaPredicted RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 ELAC2Q9BQ52 826 aaKnown RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 SENP6Q9GZR1 1112 aaPredicted RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 TRABDQ9H4I3 376 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 LRRC4Q9HBW1 653 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 MTMR10Q9NXD2 777 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 COX16Q9P0S2 106 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 TIMM13Q9Y5L4 95 aaPredicted RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 BCLAF3A2AJT9 711 aaKnown RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 FAM47DPA6NHR8 397 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 FAM155AB1AL88 458 aaPredicted RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 GABRDO14764 452 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 CHADO15335 359 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 NDUFV1P49821 464 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 MAP3K7CLP57077 242 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 SLC25A52Q3SY17 297 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 EFHC2Q5JST6 749 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 KIAA0319Q5VV43 1072 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 STRADAQ7RTN6 431 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 PIGWQ7Z7B1 504 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 C4orf33Q8N1A6 199 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 SIX6OS1Q8N1H7 587 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 PYROXD2Q8N2H3 581 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 RTP4Q96DX8 246 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 CSPG4P5Q96PW8 444 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 SMC6Q96SB8 1091 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 ZIC5Q96T25 663 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 PPCSQ9HAB8 311 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 MIOSQ9NXC5 875 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 GOLGA6L7A0A1B0GV03 622 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ARL5CA6NH57 179 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ZNF487B1APH4 448 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 AVILO75366 819 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ATP2A2P16615 1042 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 GOT1P17174 413 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ELK3P41970 407 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 FLT3LGP49771 235 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 SCNN1GP51170 649 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 FCGRTP55899 365 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 YWHAZP63104 245 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 MRPS5P82675 430 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 SLC10A2Q12908 348 aaPredicted RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 TRIM32Q13049 653 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 PPP1R21Q6ZMI0 780 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 SERINC5Q86VE9 423 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 IGDCC3Q8IVU1 814 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 CCDC110Q8TBZ0 833 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 CKAP2Q8WWK9 683 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 PAIP2Q9BPZ3 127 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 KLC2Q9H0B6 622 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 FGFR1OP2Q9NVK5 253 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 HTTP42858 3142 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ZFXP17010 805 aaPredicted RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 RABGGTBP53611 331 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 PITX1P78337 314 aaPredicted RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 KLHL38Q2WGJ6 581 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 DSTYKQ6XUX3 929 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 CDKL3Q8IVW4 592 aaPredicted RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 RNF169Q8NCN4 708 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 C3orf58Q8NDZ4 430 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 TGS1Q96RS0 853 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 PAFAH2Q99487 392 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 ACSS3Q9H6R3 686 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 AGO3Q9H9G7 860 aaKnown RBP14.14□□□□□ -0.15
NEK3-205ENST00000610828 CRTAC1Q9NQ79 661 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 CHST12Q9NRB3 414 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 SENP1Q9P0U3 644 aa14.14□□□□□ -0.15
NEK3-205ENST00000610828 SEPT4O43236 478 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 CA12O43570 354 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 DAB1O75553 588 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 APRTP07741 180 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 AMPD1P23109 780 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 THPOP40225 353 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 ARL4AP40617 200 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 AGMOQ6ZNB7 445 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 SGSM3Q96HU1 749 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 OSBPL7Q9BZF2 842 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 ETNK2Q9NVF9 386 aa14.13□□□□□ -0.15
NEK3-205ENST00000610828 A0A1W2PPM1 405 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 GPR182O15218 404 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 ASGR1P07306 291 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 NOS2P35228 1153 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 LHX1P48742 406 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 NR2C2P49116 596 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms