RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
SGMS1-209ENST00000609445 MBD1Q9UIS9 605 aaPredicted RBP16.85■□□□□ 0.29
SGMS1-209ENST00000609445 DNMT3LQ9UJW3 386 aa16.85■□□□□ 0.29
SGMS1-209ENST00000609445 LSM7Q9UK45 103 aaKnown RBP16.85■□□□□ 0.29
SGMS1-209ENST00000609445 PATE3B3GLJ2 98 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 TYRP14679 529 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 PMS1P54277 932 aaKnown RBP16.84■□□□□ 0.29
SGMS1-209ENST00000609445 RAD23BP54727 409 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 GOLGA8FQ08AF8 430 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 GOLGA8DPQ0D2H9 430 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CBWD6Q4V339 395 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 DCAF17Q5H9S7 520 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CBWD3Q5JTY5 395 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CBWD5Q5RIA9 395 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 TCERG1LQ5VWI1 586 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 RNF43Q68DV7 783 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 GRAMD4Q6IC98 578 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 TOGARAM2Q6ZUX3 1019 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CCDC186Q7Z3E2 898 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CYP2U1Q7Z449 544 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 C11orf74Q86VG3 221 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 PGBD3Q8N328 593 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 BHMTQ93088 406 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 TMEM176AQ96HP8 235 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 ACOX2Q99424 681 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 PLK2Q9NYY3 685 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 CEP295Q9C0D2 2601 aa16.84■□□□□ 0.29
SGMS1-209ENST00000609445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 LNP1A1A4G5 178 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 CACNG3O60359 315 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 STX10O60499 249 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 STC2O76061 302 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 HMBSP08397 361 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 PLA2G4AP47712 749 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 MAP7D1Q3KQU3 841 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 ANKRD40Q6AI12 368 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 KLHDC10Q6PID8 442 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 Q6ZNB5 142 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 ARMCX6Q7L4S7 300 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 TMEFF1Q8IYR6 380 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
SGMS1-209ENST00000609445 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 MARK1Q9P0L2 795 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 RASAL2Q9UJF2 1139 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 USP3Q9Y6I4 520 aa16.83■□□□□ 0.28
SGMS1-209ENST00000609445 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 MAP3K13O43283 966 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 KLKB1P03952 638 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 HOXB2P14652 356 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 GABRG2P18507 467 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 PTGER3P43115 390 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 EFEMP1Q12805 493 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 PREPLQ4J6C6 727 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 ZNF658Q5TYW1 1059 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 PIGZQ86VD9 579 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 ZC3H3Q8IXZ2 948 aaKnown RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 PIGKQ92643 395 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 SPACA7Q96KW9 195 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 XPO6Q96QU8 1125 aaKnown RBP16.82■□□□□ 0.28
SGMS1-209ENST00000609445 TSG101Q99816 390 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 DNAI2Q9GZS0 605 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 WDR35Q9P2L0 1181 aa16.82■□□□□ 0.28
SGMS1-209ENST00000609445 KMT2BQ9UMN6 2715 aaPredicted RBP16.81■□□□□ 0.28
SGMS1-209ENST00000609445 A0A1W2PQF6 199 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 GOLGA6L4A6NEF3 574 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 C4orf47A7E2U8 309 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 TULP2O00295 520 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 SLC16A3O15427 465 aaKnown RBP16.81■□□□□ 0.28
SGMS1-209ENST00000609445 CISD3P0C7P0 127 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 RALAP11233 206 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 NTSR1P30989 418 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 PSEN1P49768 467 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 ARHGAP17Q68EM7 881 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 NUDT18Q6ZVK8 323 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 LPCAT2Q7L5N7 544 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 TRMT11Q7Z4G4 463 aaKnown RBP16.81■□□□□ 0.28
SGMS1-209ENST00000609445 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 NDRG1Q92597 394 aaKnown RBP16.81■□□□□ 0.28
SGMS1-209ENST00000609445 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
SGMS1-209ENST00000609445 CLIC5Q9NZA1 410 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 STARD13Q9Y3M8 1113 aa16.81■□□□□ 0.28
SGMS1-209ENST00000609445 ADAMTS9Q9P2N4 1935 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 ATXN2Q99700 1313 aaKnown RBP16.8■□□□□ 0.28
SGMS1-209ENST00000609445 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
SGMS1-209ENST00000609445 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
SGMS1-209ENST00000609445 DGKGP49619 791 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 IRX4P78413 519 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
SGMS1-209ENST00000609445 LRMPQ12912 555 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 CUL2Q13617 745 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms