RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PSTKQ8IV42 348 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 GPR152Q8TDT2 470 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 MICAL1Q8TDZ2 1067 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 DQX1Q8TE96 717 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 ARNTL2Q8WYA1 636 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 NTAN1Q96AB6 310 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 MRPL38Q96DV4 380 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 CDK5RAP1Q96SZ6 601 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 OLA1Q9NTK5 396 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 DDX56Q9NY93 547 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 CALCOCO1Q9P1Z2 691 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 DPP7Q9UHL4 492 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 TTC7AQ9ULT0 858 aaPredicted RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.22■□□□□ 0.35
PMF1-206ENST00000606952 MYO7AQ13402 2215 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 CAPN9O14815 690 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 IRAK2O43187 625 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 TADA3O75528 432 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 URI1O94763 535 aaPredicted RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 TCF4P15884 667 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 PTPN7P35236 360 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 EPHA5P54756 1037 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 RWDD2BP57060 319 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 PITX1P78337 314 aaPredicted RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 IFRD2Q12894 506 aaPredicted RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 BOLA3Q53S33 107 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 SH3PXD2AQ5TCZ1 1133 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 DAB2IPQ5VWQ8 1189 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 KLHDC10Q6PID8 442 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 ZNF572Q7Z3I7 529 aaPredicted RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 TMC8Q8IU68 726 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 CREG2Q8IUH2 290 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 CMASQ8NFW8 434 aaPredicted RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 EXD1Q8NHP7 514 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 FAM71BQ8TC56 605 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 PEBP4Q96S96 227 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
PMF1-206ENST00000606952 ZDHHC7Q9NXF8 308 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 USP18Q9UMW8 372 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 USTQ9Y2C2 406 aa17.21■□□□□ 0.35
PMF1-206ENST00000606952 ZNF840PA6NDX5 716 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 ZNF487B1APH4 448 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 M0QYT0 321 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 KCNK3O14649 394 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 LRG1P02750 347 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 F11P03951 625 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 RALAP11233 206 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 CXCR3P49682 368 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 ATP11AP98196 1134 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 SCAPQ12770 1279 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 TAZQ16635 292 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 PTPROQ16827 1216 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 TXNRD3NBQ6F5E7 133 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 TMEM150AQ86TG1 271 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 TAC4Q86UU9 113 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 ACTRT1Q8TDG2 376 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 COG1Q8WTW3 980 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 EDEM1Q92611 657 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 SERPINB11Q96P15 392 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 MAN1C1Q9NR34 630 aa17.2■□□□□ 0.34
PMF1-206ENST00000606952 COLQQ9Y215 455 aaPredicted RBP17.2■□□□□ 0.34
PMF1-206ENST00000606952 RARGP13631 454 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 PFKLP17858 780 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 ARSEP51690 589 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 COPS2P61201 443 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 DEUP1Q05D60 604 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 CLUL1Q15846 466 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 CDO1Q16878 200 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 RAB6CQ53S08 254 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 BRMS1LQ5PSV4 323 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 PRPF38BQ5VTL8 546 aaKnown RBP17.19■□□□□ 0.34
PMF1-206ENST00000606952 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 ADGRD2Q7Z7M1 963 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 RBM41Q96IZ5 413 aaKnown RBP17.19■□□□□ 0.34
PMF1-206ENST00000606952 RAB6CQ9H0N0 254 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 PIGVQ9NUD9 493 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 LMCD1Q9NZU5 365 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 NOTCH4Q99466 2003 aa17.19■□□□□ 0.34
PMF1-206ENST00000606952 PRPSAP2O60256 369 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 SRGAP2O75044 1071 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 OLFM2O95897 454 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 OAS1P00973 400 aaKnown RBP17.18■□□□□ 0.34
PMF1-206ENST00000606952 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 RARAP10276 462 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 EPCAMP16422 314 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 GBP1P32455 592 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 ITIH3Q06033 890 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 RING1Q06587 406 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 PPP2R5EQ16537 467 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 PABPC1LQ4VXU2 614 aaKnown RBP17.18■□□□□ 0.34
PMF1-206ENST00000606952 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 TADA2BQ86TJ2 420 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms