RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CAPN9O14815 690 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 MSI1O43347 362 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 MBTPS2O43462 519 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 PRAMEF12O95522 483 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 OAS1P00973 400 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 CKMP06732 381 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 GLI1P08151 1106 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 CCDC175P0C221 793 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SP100P23497 879 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 MATKP42679 507 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 PPP3CCP48454 512 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 PSEN1P49768 467 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 KRT83P78385 493 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 OGDHQ02218 1023 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 EFEMP1Q12805 493 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SMAD4Q13485 552 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 C15orf59Q2T9L4 293 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 ARHGAP15Q53QZ3 475 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 RAB6CQ53S08 254 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 DCAF6Q58WW2 860 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ATAT1Q5SQI0 421 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 C10orf120Q5SQS8 335 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 HECTD3Q5T447 861 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 MSANTD2Q6P1R3 559 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 DCUN1D2Q6PH85 259 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 TAC4Q86UU9 113 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 MIB1Q86YT6 1006 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ARL14EPQ8N8R7 260 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 MAB21L3Q8N8X9 362 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ST13P5Q8NFI4 369 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 ZNF564Q8TBZ8 553 aaPredicted RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 DQX1Q8TE96 717 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 RXFP2Q8WXD0 754 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 RFFLQ8WZ73 363 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SUSD6Q92537 303 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 FGF13Q92913 245 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 BTBD6Q96KE9 485 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ZSWIM3Q96MP5 696 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 MYADMQ96S97 322 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SLC46A2Q9BY10 475 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 RAB6CQ9H0N0 254 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 MRPL47Q9HD33 250 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
MSH6-211ENST00000606499 SMPD4Q9NXE4 827 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.122e-7■■■■□ 21.4
MSH6-211ENST00000606499 CALCOCO1Q9P1Z2 691 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 CTTNBP2NLQ9P2B4 639 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 RASAL2Q9UJF2 1139 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ANAPC7Q9UJX3 599 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 INTUQ9ULD6 942 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SSUH2Q9Y2M2 353 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 PPP2R2CQ9Y2T4 447 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 DUSP10Q9Y6W6 482 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 A0A0C4DFX4 3053 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SYNJ2BP-COX16A0A087WUM0 186 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 TRAV19A0A0A6YYK7 116 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 PJA2O43164 708 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CCP110O43303 1012 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 OLFM2O95897 454 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 IRF1P10914 325 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 RALAP11233 206 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 PDGFRAP16234 1089 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 HDCP19113 662 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 GPD1P21695 349 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 NOS2P35228 1153 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 SULT1E1P49888 294 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 TUBP50607 506 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 ATXN1P54253 815 aaKnown RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 ZXDBP98169 803 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 ATP11AP98196 1134 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 NME3Q13232 169 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CDO1Q16878 200 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 LEXMQ3ZCV2 418 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CCDC14Q49A88 953 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 DAB2IPQ5VWQ8 1189 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 PTCRAQ6ISU1 281 aaPredicted RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 BEND5Q7L4P6 421 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CPNE8Q86YQ8 564 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 RHOT2Q8IXI1 618 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 TTC16Q8NEE8 873 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 ZSCAN18Q8TBC5 510 aaPredicted RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 SLC35G2Q8TBE7 412 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 RNF139Q8WU17 664 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 ZFRQ96KR1 1074 aaKnown RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 NECTIN4Q96NY8 510 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 TBCBQ99426 244 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 NPY6RQ99463 290 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 DDX23Q9BUQ8 820 aaKnown RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 TRIM62Q9BVG3 475 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 NACA2Q9H009 215 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 SMOC2Q9H3U7 446 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 TASP1Q9H6P5 420 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 FAM204AQ9H8W3 233 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms