RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 EFHC1Q5JVL4 640 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 NAA35Q5VZE5 725 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 TOGARAM2Q6ZUX3 1019 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 BEND5Q7L4P6 421 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 BHLHA9Q7RTU4 235 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 TTC16Q8NEE8 873 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 NDRG1Q92597 394 aaKnown RBP14.94□□□□□ -0.02
CTSA-211ENST00000606066 FAM149B1Q96BN6 582 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 RSPRY1Q96DX4 576 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 GVINP1Q7Z2Y8 2422 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 CAPN9O14815 690 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 NARSO43776 548 aaKnown RBP14.93□□□□□ -0.02
CTSA-211ENST00000606066 NSFP46459 744 aaKnown RBP14.93□□□□□ -0.02
CTSA-211ENST00000606066 GABRB2P47870 512 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 YWHAZP63104 245 aaKnown RBP14.93□□□□□ -0.02
CTSA-211ENST00000606066 EFEMP1Q12805 493 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 ZNF77Q15935 545 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 OR6B2Q6IFH4 312 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 ASCL5Q7RTU5 278 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 CLEC4CQ8WTT0 213 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 DNASE1L2Q92874 299 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 HAUS4Q9H6D7 363 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 POPDC2Q9HBU9 364 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 ASNSD1Q9NWL6 643 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 WNT16Q9UBV4 365 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 NUDT5Q9UKK9 219 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 FBXL21Q9UKT6 434 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 SH3BP1Q9Y3L3 701 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 FAM186AA6NE01 2351 aa14.93□□□□□ -0.02
CTSA-211ENST00000606066 DOCK6Q96HP0 2047 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 E2F8A0AVK6 867 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 SLC9A3R1O14745 358 aaPredicted RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 AP5Z1O43299 807 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 HSF2BPO75031 334 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 ERBB2P04626 1255 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 SERPING1P05155 500 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 UNGP13051 313 aaPredicted RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 NCAM1P13591 858 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 KPNA1P52294 538 aaPredicted RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 SLC6A3Q01959 620 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 CENPCQ03188 943 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 USP4Q13107 963 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 FAM183BPQ6ZVS7 135 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 OR8K1Q8NGG5 319 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 CSGALNACT1Q8TDX6 532 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 EDEM1Q92611 657 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 MRFAP1L1Q96HT8 127 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 PCDHB18PQ96TA0 734 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 KLF16Q9BXK1 252 aaPredicted RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 MARCH2Q9P0N8 246 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 TBC1D14Q9P2M4 693 aa14.92□□□□□ -0.02
CTSA-211ENST00000606066 LSM7Q9UK45 103 aaKnown RBP14.92□□□□□ -0.02
CTSA-211ENST00000606066 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 MMP8P22894 467 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 SCNN1AP37088 669 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 IFNAR2P48551 515 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 ZNF75DP51815 510 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 ZXDBP98169 803 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
CTSA-211ENST00000606066 OLFML1Q6UWY5 402 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 TMC6Q7Z403 805 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 PHF13Q86YI8 300 aaPredicted RBP14.91□□□□□ -0.02
CTSA-211ENST00000606066 CNGA4Q8IV77 575 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 DRC7Q8IY82 874 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 OSCP1Q8WVF1 389 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 ZFRQ96KR1 1074 aaKnown RBP14.91□□□□□ -0.02
CTSA-211ENST00000606066 SMOC2Q9H3U7 446 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 DUS2Q9NX74 493 aaKnown RBP14.91□□□□□ -0.02
CTSA-211ENST00000606066 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 WDR35Q9P2L0 1181 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 TJP2Q9UDY2 1190 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 GREB1Q4ZG55 1949 aa14.91□□□□□ -0.02
CTSA-211ENST00000606066 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 MDM4O15151 490 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 CALB1P05937 261 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SKILP12757 684 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
CTSA-211ENST00000606066 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
CTSA-211ENST00000606066 ACAD10Q6JQN1 1059 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 MSANTD2Q6P1R3 559 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SLC26A9Q7LBE3 791 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 ZNF571Q7Z3V5 609 aaPredicted RBP14.9□□□□□ -0.02
CTSA-211ENST00000606066 XYLT1Q86Y38 959 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SLC30A5Q8TAD4 765 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms