RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTSA-210ENST00000606000 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 TIE1P35590 1138 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 NRLP54845 237 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 SLC8A3P57103 927 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 DAOAP59103 153 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 CNGA2Q16280 664 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 DENND1BQ6P3S1 775 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 RSRC2Q7L4I2 434 aaKnown RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 KIAA2013Q8IYS2 634 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 ALLCQ8N6M5 410 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 KCTD13Q8WZ19 329 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 PLK2Q9NYY3 685 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 MARCH2Q9P0N8 246 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
CTSA-210ENST00000606000 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
CTSA-210ENST00000606000 MSI1O43347 362 aaKnown RBP12.88□□□□□ -0.35
CTSA-210ENST00000606000 ATG13O75143 517 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 APODP05090 189 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 TYRP14679 529 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 PON1P27169 355 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 EIF2DP41214 584 aaKnown RBP12.88□□□□□ -0.35
CTSA-210ENST00000606000 KIR2DL1P43626 348 aaPredicted RBP12.88□□□□□ -0.35
CTSA-210ENST00000606000 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
CTSA-210ENST00000606000 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 TOGARAM2Q6ZUX3 1019 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 SYT13Q7L8C5 426 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 ARHGAP18Q8N392 663 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 ZNF276Q8N554 614 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 MIS12Q9H081 205 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
CTSA-210ENST00000606000 CYTH4Q9UIA0 394 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 HCN2Q9UL51 889 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
CTSA-210ENST00000606000 SGK1O00141 431 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 CACNG3O60359 315 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 KLF8O95600 359 aaPredicted RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 HOXA6P31267 233 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 USP8P40818 1118 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 MAN2A1Q16706 1144 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 EXOC3L4Q17RC7 722 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 TADA2BQ86TJ2 420 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 FMNL3Q8IVF7 1028 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 TERB1Q8NA31 727 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 IL17RCQ8NAC3 791 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 ACDQ96AP0 544 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 ERLEC1Q96DZ1 483 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 CNGB3Q9NQW8 809 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
CTSA-210ENST00000606000 AGO1Q9UL18 857 aaKnown RBP12.87□□□□□ -0.35
CTSA-210ENST00000606000 FAM170AA1A519 330 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
CTSA-210ENST00000606000 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 PRRT4C9JH25 899 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 DCLK1O15075 740 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 THAP12O43422 761 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 ADAM23O75077 832 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 GNA15P30679 374 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 GRIA2P42262 883 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 WASP42768 502 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 GPD2P43304 727 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 MFAP3P55082 362 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 COG7P83436 770 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 KCNJ12Q14500 433 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 GRAMD4Q6IC98 578 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 ANO7Q6IWH7 933 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms