RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RSPO2Q6UXX9 243 aaPredicted RBP19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 SYDE1Q6ZW31 735 aaPredicted RBP19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 LRRC43Q8N309 656 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 PCDH19Q8TAB3 1148 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 SLC35B2Q8TB61 432 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 MTMR10Q9NXD2 777 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 DRG1Q9Y295 367 aaKnown RBP19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 ATP8A1Q9Y2Q0 1164 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 TANC1Q9C0D5 1861 aa19.98■□□□□ 0.79
TUBB4B-202ENST00000604929 APOC4-APOC2K7ER74 178 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 AGPSO00116 658 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 DGKIO75912 1065 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 APOC2P02655 101 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 FGFR3P22607 806 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 SLC5A3P53794 718 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 LMNB2Q03252 620 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 GPS2Q13227 327 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 MRPL58Q14197 206 aaKnown RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ZC3H18Q86VM9 953 aaKnown RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 PQLC3Q8N755 202 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 TTC13Q8NBP0 860 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 GPR152Q8TDT2 470 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 P3H4Q92791 437 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ART4Q93070 314 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 KCTD15Q96SI1 283 aaPredicted RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ACBD3Q9H3P7 528 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 HEY1Q9Y5J3 304 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 VWA8A3KMH1 1905 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 TP73O15350 636 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ACRP10323 421 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ATF2P15336 505 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 KLRC2P26717 231 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 RDXP35241 583 aaKnown RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 HSPA9P38646 679 aaKnown RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 PGFP49763 221 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 ALLCQ8N6M5 410 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 TTC9BQ8N6N2 239 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 PLD5Q8N7P1 536 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 LRRN4Q8WUT4 740 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 NKD2Q969F2 451 aaPredicted RBP19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 TMEM175Q9BSA9 504 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 FZD10Q9ULW2 581 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 SLC27A5Q9Y2P5 690 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 USP3Q9Y6I4 520 aa19.97■□□□□ 0.79
TUBB4B-202ENST00000604929 SOAT2O75908 522 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 OAS2P29728 719 aaKnown RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 HSD17B3P37058 310 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 ITGA8P53708 1063 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 GDF10P55107 478 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 EIF3EP60228 445 aaKnown RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 TFDP2Q14188 446 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 PKN2Q16513 984 aaKnown RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 DPYSL2Q16555 572 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 NFE2Q16621 373 aaPredicted RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 SPOUT1Q5T280 376 aaKnown RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 CFAP58Q5T655 872 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 ZNF280DQ6N043 979 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 PRSS55Q6UWB4 352 aaPredicted RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 BNIPLQ7Z465 357 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 TMC3Q7Z5M5 1100 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 CCDC89Q8N998 374 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 UBLCP1Q8WVY7 318 aaPredicted RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 PIK3R5Q8WYR1 880 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 LRRC45Q96CN5 670 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 SNF8Q96H20 258 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 ZIM3Q96PE6 472 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 DDIT4Q9NX09 232 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 FNDC1Q4ZHG4 1894 aaPredicted RBP19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
TUBB4B-202ENST00000604929 TNFRSF10BO14763 440 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 POLR3GO15318 223 aaPredicted RBP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 TIMP1P01033 207 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 ITGAVP06756 1048 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 CPB1P15086 417 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 RAG1P15918 1043 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 GOT1P17174 413 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 ITIH2P19823 946 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 DEFB103AP81534 67 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 FAM43BQ6ZT52 329 aaPredicted RBP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 NECAB2Q7Z6G3 386 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 MREGQ8N565 214 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 CCDC33Q8N5R6 958 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 PNPLA8Q9NP80 782 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 CWC15Q9P013 229 aaKnown RBP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 WHRNQ9P202 907 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 PCDHB5Q9Y5E4 795 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 MICAL3Q7RTP6 2002 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 APOL1O14791 398 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 SYF2O95926 243 aaKnown RBP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 RBP3P10745 1247 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 NRLP54845 237 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 UAP1Q16222 522 aaPredicted RBP19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 P3H1Q32P28 736 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 HSP90B2PQ58FF3 399 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 CCDC25Q86WR0 208 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 UNC45BQ8IWX7 931 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 IQCKQ8N0W5 287 aa19.95■□□□□ 0.78
TUBB4B-202ENST00000604929 TOP1MTQ969P6 601 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms