RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CYP2F1P24903 491 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HCAR3P49019 387 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TUFMP49411 452 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CXCR3P49682 368 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 VCPP55072 806 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CAV1Q03135 178 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DEUP1Q05D60 604 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BYSLQ13895 437 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KRT81Q14533 505 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ARL13BQ3SXY8 428 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KCNT1Q5JUK3 1230 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BRMS1LQ5PSV4 323 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BSPRYQ5W0U4 402 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC9A4Q6AI14 798 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TTC27Q6P3X3 843 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SND1Q7KZF4 910 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BZW1Q7L1Q6 419 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HDXQ7Z353 690 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TMEM173Q86WV6 379 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CEP57Q86XR8 500 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CLP1Q92989 425 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CDK5RAP1Q96SZ6 601 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HERPUD2Q9BSE4 406 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TTLL2Q9BWV7 592 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MAK16Q9BXY0 300 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 OLA1Q9NTK5 396 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 WHRNQ9P202 907 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FZD10Q9ULW2 581 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AP4E1Q9UPM8 1137 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CFAP69A5D8W1 941 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PI4K2BG5E9Z4 385 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MAP2K7O14733 419 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CST8O60676 142 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ABLIM3O94929 683 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 C1RP00736 705 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NCAM1P13591 858 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 L1CAMP32004 1257 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ARL4AP40617 200 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NR2C2P49116 596 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 XRCC4Q13426 336 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NOMO1Q15155 1222 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SCYL2Q6P3W7 929 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ADAT2Q7Z6V5 191 aaKnown RBP12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CASKIN2Q8WXE0 1202 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HERVK_113Q902F9 699 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HSPH1Q92598 858 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 YME1L1Q96TA2 773 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HEMGNQ9BXL5 484 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CALN1Q9BXU9 219 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PCDHB12Q9Y5F1 795 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MRPL42Q9Y6G3 142 aaKnown RBP12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GBF1Q92538 1859 aa12.78□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 H3BRJ5 948 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SMAPO00193 183 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IRAK2O43187 625 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 URODP06132 367 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 OR4Q2P0C623 313 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLC2A3P11169 496 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KRT10P13645 584 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ITIH2P19823 946 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IL4RP24394 825 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 STIP1P31948 543 aaKnown RBP12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ADRA1BP35368 520 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ROR1Q01973 937 aa12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KRT17Q04695 432 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms