RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NR1H2P55055 460 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 DCAF7P61962 342 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PPARAQ07869 468 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF844Q08AG5 666 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 WDR72Q3MJ13 1102 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 AKAP4Q5JQC9 854 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 C1orf141Q5JVX7 400 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 SPOPLQ6IQ16 392 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 SATL1Q86VE3 508 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PDZD8Q8NEN9 1154 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PYROXD1Q8WU10 500 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 BSNDQ8WZ55 320 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 CENPIQ92674 756 aaPredicted RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 TNFRSF25Q93038 417 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 ZUFSPQ96AP4 578 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 SDCCAG3Q96C92 435 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 AIFM3Q96NN9 605 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 RPRD1AQ96P16 312 aaPredicted RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 NT5C1BQ96P26 610 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PPP1R16BQ96T49 567 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 SELENOSQ9BQE4 189 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 NEURL2Q9BR09 285 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 AP5M1Q9H0R1 490 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 VPS16Q9H269 839 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 DPH5Q9H2P9 285 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 MVB12BQ9H7P6 319 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 SCPEP1Q9HB40 452 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PLGRKTQ9HBL7 147 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 RXFP1Q9HBX9 757 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 AGPAT3Q9NRZ7 376 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 TRNAU1APQ9NX07 287 aaKnown RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 GIN1Q9NXP7 522 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 MOCS1Q9NZB8 636 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 GPRC5BQ9NZH0 403 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 DNAJC16Q9Y2G8 782 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 RTCBQ9Y3I0 505 aaKnown RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 KIAA0232Q92628 1395 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 COL24A1Q17RW2 1714 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SNTNA6NMZ2 147 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 H7C1D1 291 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 GPR25O00155 361 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 FRS3O43559 492 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ECE2O60344 883 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SNX3O60493 162 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 JAK2O60674 1132 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 AOC2O75106 756 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 STARD3NLO95772 234 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 URODP06132 367 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ABCB1P08183 1280 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 PRKACAP17612 351 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 IL13P35225 146 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 GNL1P36915 607 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 MRPS15P82914 257 aaKnown RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 HSPA14Q0VDF9 509 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SCARB2Q14108 478 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 STAT4Q14765 748 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 NR1I3Q14994 352 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 TGFBIQ15582 683 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF124Q15973 351 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 MCMDC2Q4G0Z9 681 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 KRBOX4Q5JUW0 171 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF772Q68DY9 489 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ZYG11AQ6WRX3 759 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 AGMOQ6ZNB7 445 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 CYP4V2Q6ZWL3 525 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF572Q7Z3I7 529 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 NLRP8Q86W28 1048 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 AVL9Q8NBF6 648 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 CEP76Q8TAP6 659 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 INPP5DQ92835 1189 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 EME1Q96AY2 570 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 CCDC138Q96M89 665 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 DACH2Q96NX9 599 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 CDK5RAP1Q96SZ6 601 aaKnown RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 UHRF1Q96T88 793 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 HAUS8Q9BT25 410 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SPON2Q9BUD6 331 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SHCBP1LQ9BZQ2 653 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 EPB41L5Q9HCM4 733 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 GDF3Q9NR23 364 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 FARSBQ9NSD9 589 aaKnown RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 THAP1Q9NVV9 213 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 EMC3Q9P0I2 261 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 GRHPRQ9UBQ7 328 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 TUBE1Q9UJT0 475 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 NFE2L3Q9Y4A8 694 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 SALL3Q9BXA9 1300 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 MYH8P13535 1937 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ARHGEF10O15013 1369 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 KDM3BQ7LBC6 1761 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 ZSCAN5BA6NJL1 495 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 PCP4L1A6NKN8 68 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 A6NLC8 198 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 GSG1L2A8MUP6 293 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 INO80B-WBP1J3KQ70 363 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 O00370 1275 aa4.89□□□□□ -1.63
LINC01109-201ENST00000603837 HGSO14964 777 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 DYNC1LI2O43237 492 aaPredicted RBP4.89□□□□□ -1.63
LINC01109-201ENST00000603837 CCNT1O60563 726 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms