RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 IFT74Q96LB3 600 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ABHD1Q96SE0 405 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 BRIP1Q9BX63 1249 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ITPAQ9BY32 194 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SRCIN1Q9C0H9 1055 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SENP6Q9GZR1 1112 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 REXO4Q9GZR2 422 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 C1orf21Q9H246 121 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TM9SF3Q9HD45 589 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CTNNAL1Q9UBT7 734 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 FBXO40Q9UH90 709 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 FEM1BQ9UK73 627 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ANGPTL2Q9UKU9 493 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SNX6Q9UNH7 406 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 AURKCQ9UQB9 309 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CHTOPQ9Y3Y2 248 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CCDC169A6NNP5 214 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SPECC1L-ADORA2AF8WAN1 911 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 KRIT1O00522 736 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ADAMTS3O15072 1205 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ARHGAP6O43182 974 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TPOP07202 933 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 GLI1P08151 1106 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 RGS2P41220 211 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ALDH9A1P49189 494 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 METAP1P53582 386 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ACTR1AP61163 376 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CREB5Q02930 508 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TYRO3Q06418 890 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TUBB2AQ13885 445 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 DHX34Q14147 1143 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 E2F2Q14209 437 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SF1Q15637 639 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PDCD4Q53EL6 469 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ODF2Q5BJF6 829 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ANKRD20A8PQ5CZ79 823 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 DEPDC1Q5TB30 811 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TCERG1LQ5VWI1 586 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC25A24Q6NUK1 477 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 KLC3Q6P597 504 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 LYSMD3Q7Z3D4 306 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CRACR2BQ8N4Y2 399 aaPredicted RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ZMIZ2Q8NF64 920 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 GANCQ8TET4 914 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SSH1Q8WYL5 1049 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CDKL2Q92772 493 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TUBB2BQ9BVA1 445 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MIS12Q9H081 205 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PCED1AQ9H1Q7 454 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 GBA3Q9H227 469 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CARD9Q9H257 536 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PFDN4Q9NQP4 134 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 AGPAT3Q9NRZ7 376 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 EURLQ9NYK6 297 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 NDUFA13Q9P0J0 144 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ATPIF1Q9UII2 106 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A0J9YVX5 310 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SMIM30A4D0T7 59 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 LRRIQ4A6NIV6 560 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 H0YCG3 227 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TAF4O00268 1085 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TRPA1O75762 1119 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TRIM16O95361 564 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 LCA5LO95447 670 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 BAG3O95817 575 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 EGFRP00533 1210 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CSH1P0DML2 217 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CSH2P0DML3 217 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MYL4P12829 197 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PRG2P13727 222 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CES1P23141 567 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SFPQP23246 707 aaKnown RBP eCLIP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SP100P23497 879 aaPredicted RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PRKCIP41743 596 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ADARP55265 1226 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CSNK2BP67870 215 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 RPP30P78346 268 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 KCNJ10P78508 379 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MRPS25P82663 173 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 DSG1Q02413 1049 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PTSQ03393 145 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 HSPA14Q0VDF9 509 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TFCP2Q12800 502 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 NDUFA5Q16718 116 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MPEG1Q2M385 716 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TTC22Q5TAA0 569 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CYP4A22Q5TCH4 519 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 NAA35Q5VZE5 725 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ALS2CLQ60I27 953 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 CIAPIN1Q6FI81 312 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 WDR93Q6P2C0 686 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MPRIPQ6WCQ1 1025 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PALB2Q86YC2 1186 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 KCNH5Q8NCM2 988 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC22A8Q8TCC7 542 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 RHPN1Q8TCX5 695 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ZC3H10Q96K80 434 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TUBGCP5Q96RT8 1024 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms