RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PTPN9P43378 593 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 RWDD2BP57060 319 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 ERVFC1P60507 584 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 GUCY2DQ02846 1103 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 SCD5Q86SK9 330 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 ZDHHC14Q8IZN3 488 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 KRT12Q99456 494 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 NMUR1Q9HB89 426 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 EPB41L5Q9HCM4 733 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 MRPL17Q9NRX2 175 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 OSER1Q9NX31 292 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 SYNJ2BP-COX16A0A087WUM0 186 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 ABLIM3O94929 683 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 KRT1P04264 644 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 SULT1E1P49888 294 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 KRT17Q04695 432 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 ARCQ7LC44 396 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 RAPGEF5Q92565 580 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 OXCT2Q9BYC2 517 aaPredicted RBP18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 POPDC2Q9HBU9 364 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 ASNSD1Q9NWL6 643 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 COX16Q9P0S2 106 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 AFF4Q9UHB7 1163 aaKnown RBP18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 NFU1Q9UMS0 254 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 CEP290O15078 2479 aa18.09■□□□□ 0.49
PPFIA3-207ENST00000602716 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 FGGP02679 453 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 CNPP09543 421 aaKnown RBP18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 FAM153BP0C7A2 387 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 FAM153CQ494X1 144 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 TTMPQ5BVD1 217 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 KATNAL2Q8IYT4 538 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 TNS4Q8IZW8 715 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 MREGQ8N565 214 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 RNF25Q96BH1 459 aaPredicted RBP18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 RUFY1Q96T51 708 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 NPY6RQ99463 290 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 AP1M1Q9BXS5 423 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 TMPRSS4Q9NRS4 437 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 GMIPQ9P107 970 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 FAM153AQ9UHL3 310 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 RSPH14Q9UHP6 348 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 USP18Q9UMW8 372 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.49
PPFIA3-207ENST00000602716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 A0A1W2PQH9 124 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 ESYT3A0FGR9 886 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 HIDE1A8MVS5 230 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 PGRMC1O00264 195 aaKnown RBP18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 TRUB2O95900 331 aaKnown RBP18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 CD48P09326 243 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 SPATA31D3P0C874 917 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 IRAK1P51617 712 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 PLPP4Q5VZY2 271 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 BSPRYQ5W0U4 402 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 SPATA31D4Q6ZUB0 917 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 NUP93Q8N1F7 819 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 SCML4Q8N228 414 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 ACTRT1Q8TDG2 376 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 CASKIN2Q8WXE0 1202 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 CENPIQ92674 756 aaPredicted RBP18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 ARL8AQ96BM9 186 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 ZIM3Q96PE6 472 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 TCF25Q9BQ70 676 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 NUDT5Q9UKK9 219 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 YIPF1Q9Y548 306 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 GBF1Q92538 1859 aa18.08■□□□□ 0.48
PPFIA3-207ENST00000602716 CDH23Q9H251 3354 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 MYO16Q9Y6X6 1858 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 RNF8O76064 485 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 RARAP10276 462 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 NCAM1P13591 858 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 YWHAGP61981 247 aaKnown RBP eCLIP18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 SMARCB1Q12824 385 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 RAB33AQ14088 237 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 CA9Q16790 459 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 MFSD7Q6UXD7 560 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 BNIPLQ7Z465 357 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 IQCKQ8N0W5 287 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 ZNF461Q8TAF7 563 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 SPPL3Q8TCT6 385 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 C2orf15Q8WU43 125 aaKnown RBP18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 IFT81Q8WYA0 676 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 HSPH1Q92598 858 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 NT5C3BQ969T7 300 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 CYP4F11Q9HBI6 524 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 PIGVQ9NUD9 493 aa18.07■□□□□ 0.48
PPFIA3-207ENST00000602716 C3orf70A6NLC5 250 aaPredicted RBP18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 GRM6O15303 877 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SART1O43290 800 aaKnown RBP18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 RAD51CO43502 376 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ATF2P15336 505 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 NOS2P35228 1153 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 PCK1P35558 622 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms