RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
ZNF544-219ENST00000602260 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
ZNF544-219ENST00000602260 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
ZNF544-219ENST00000602260 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
ZNF544-219ENST00000602260 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
ZNF544-219ENST00000602260 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
ZNF544-219ENST00000602260 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
ZNF544-219ENST00000602260 LAMA1P25391 3075 aa12.13□□□□□ -0.47
ZNF544-219ENST00000602260 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
ZNF544-219ENST00000602260 K7EQS6 105 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 AXIN1O15169 862 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 HOXC11O43248 304 aaPredicted RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 APBB3O95704 486 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 ZBED1O96006 694 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 EIF2DP41214 584 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 TKTL1P51854 596 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 GAD2Q05329 585 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 ELF2Q15723 593 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 CNGA2Q16280 664 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 TMEM25Q86YD3 366 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 CNOT6LQ96LI5 555 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 PNKPQ96T60 521 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 LRRC4Q9HBW1 653 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 EBF1Q9UH73 591 aa12.12□□□□□ -0.47
ZNF544-219ENST00000602260 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
ZNF544-219ENST00000602260 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 A0A0A0MRY4 1105 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 MPLP40238 635 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 PXNP49023 591 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ZNF132P52740 706 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ANO4Q32M45 955 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 KBTBD6Q86V97 674 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 MIB1Q86YT6 1006 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ETFBKMTQ8IXQ9 262 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 RBBP8NLQ8NC74 664 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 KCTD13Q8WZ19 329 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ZSWIM1Q9BR11 485 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ULBP1Q9BZM6 244 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 NUP62CLQ9H1M0 184 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 UBE2TQ9NPD8 197 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-219ENST00000602260 VPS45Q9NRW7 570 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
ZNF544-219ENST00000602260 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 GDF9O60383 454 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 STC2O76061 302 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 KAT7O95251 611 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 CALCAP01258 141 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 KLKB1P03952 638 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 APODP05090 189 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
ZNF544-219ENST00000602260 GRIA2P42262 883 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 SEC13P55735 322 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 COG7P83436 770 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 DMC1Q14565 340 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 STILQ15468 1287 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 Q6ZNB5 142 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
ZNF544-219ENST00000602260 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 SFTPA1Q8IWL2 248 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 NAT16Q8N8M0 369 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 SLC35F5Q8WV83 523 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
ZNF544-219ENST00000602260 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 WDR35Q9P2L0 1181 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
ZNF544-219ENST00000602260 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZNF544-219ENST00000602260 MYH10P35580 1976 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms