RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 COG7P83436 770 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 DHCR24Q15392 516 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 BBS7Q8IWZ6 715 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 EDEM1Q92611 657 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 GOLGA1Q92805 767 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 CHFRQ96EP1 664 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 LHX5Q9H2C1 402 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 CBX8Q9HC52 389 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 CYTH4Q9UIA0 394 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 CEP83Q9Y592 693 aa17.65■□□□□ 0.42
TRIM28-215ENST00000601150 KIAA1549LQ6ZVL6 1849 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 TRDMT1O14717 391 aaKnown RBP17.64■□□□□ 0.41
TRIM28-215ENST00000601150 EPHB6O15197 1021 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 GREM1O60565 184 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 STC2O76061 302 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 ADH1CP00326 375 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 LTFP02788 710 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 CYP11B1P15538 503 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 TPM4P67936 248 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 TCF15Q12870 199 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 PDCLQ13371 301 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 FILIP1LQ4L180 1135 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 TMEM196Q5HYL7 178 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 DGKKQ5KSL6 1271 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 TMEM110Q86TL2 294 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 PASD1Q8IV76 773 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 SCUBE3Q8IX30 993 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 CLEC4CQ8WTT0 213 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 NOX5Q96PH1 765 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 P2RY13Q9BPV8 354 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 IER2Q9BTL4 223 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 IRF2BPLQ9H1B7 796 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 NLRC4Q9NPP4 1024 aa17.64■□□□□ 0.41
TRIM28-215ENST00000601150 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
TRIM28-215ENST00000601150 SPATA6Q9NWH7 488 aaPredicted RBP17.64■□□□□ 0.41
TRIM28-215ENST00000601150 SLC12A8A0AV02 714 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 E5RJQ4 531 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 ADH5P11766 374 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 JAM2P57087 298 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 GRSF1Q12849 480 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRIM28-215ENST00000601150 MSANTD2Q6P1R3 559 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 RHBDF2Q6PJF5 856 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 C1orf210Q8IVY1 113 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 WDTC1Q8N5D0 677 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 CD101Q93033 1021 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 SPAG5Q96R06 1193 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 TRIM62Q9BVG3 475 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 DCLK3Q9C098 648 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 PDCL3Q9H2J4 239 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 CHRDQ9H2X0 955 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 ZNF510Q9Y2H8 683 aa17.63■□□□□ 0.41
TRIM28-215ENST00000601150 PAPSS1O43252 624 aaPredicted RBP17.62■□□□□ 0.41
TRIM28-215ENST00000601150 GFPT2O94808 682 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 HMBSP08397 361 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 SOX5P35711 763 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 STAT1P42224 750 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 GALK1P51570 392 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 SNX16P57768 344 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 CCINQ13939 588 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 ANGPT1Q15389 498 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 LY6G5CQ5SRR4 150 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 FSTL4Q6MZW2 842 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 Q6ZNB5 142 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 FMNL3Q8IVF7 1028 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 SYNPOQ8N3V7 929 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 C1orf131Q8NDD1 294 aaKnown RBP17.62■□□□□ 0.41
TRIM28-215ENST00000601150 PLD4Q96BZ4 506 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 PPP1R13BQ96KQ4 1090 aa17.62■□□□□ 0.41
TRIM28-215ENST00000601150 RBM12Q9NTZ6 932 aaKnown RBP17.62■□□□□ 0.41
TRIM28-215ENST00000601150 HBS1LQ9Y450 684 aaKnown RBP17.62■□□□□ 0.41
TRIM28-215ENST00000601150 H0Y858 1186 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 GOLGA6L19H0YKK7 550 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 TEX33O43247 280 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 SERPINC1P01008 464 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 KLKB1P03952 638 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 DRD1P21728 446 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 CORO1AP31146 461 aaKnown RBP17.61■□□□□ 0.41
TRIM28-215ENST00000601150 OPRD1P41143 372 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 GAD2Q05329 585 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 NFKBIBQ15653 356 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 GAB4Q2WGN9 574 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 TAF3Q5VWG9 929 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 NAIF1Q69YI7 327 aaPredicted RBP17.61■□□□□ 0.41
TRIM28-215ENST00000601150 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
TRIM28-215ENST00000601150 TMEM35BQ8NCS4 154 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 EPS8L1Q8TE68 723 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 DDX1Q92499 740 aaKnown RBP17.61■□□□□ 0.41
TRIM28-215ENST00000601150 FAM149B1Q96BN6 582 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 CPXM1Q96SM3 734 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 FBRSL1Q9HCM7 1045 aaKnown RBP17.61■□□□□ 0.41
TRIM28-215ENST00000601150 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 SFMBT1Q9UHJ3 866 aa17.61■□□□□ 0.41
TRIM28-215ENST00000601150 CACNA1IQ9P0X4 2223 aa17.6■□□□□ 0.41
TRIM28-215ENST00000601150 A0A1B0GTH6 734 aa17.6■□□□□ 0.41
TRIM28-215ENST00000601150 HOXC11O43248 304 aaPredicted RBP17.6■□□□□ 0.41
TRIM28-215ENST00000601150 LAMTOR5O43504 91 aa17.6■□□□□ 0.41
TRIM28-215ENST00000601150 FYNP06241 537 aa17.6■□□□□ 0.41
TRIM28-215ENST00000601150 NCAM1P13591 858 aa17.6■□□□□ 0.41
TRIM28-215ENST00000601150 CDH5P33151 784 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms