RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	RELN	P78509	3460 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	TEX51	A0A1B0GUA7	166 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	FAM92A	A1XBS5	289 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	KCNK3	O14649	394 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	SLC26A4	O43511	780 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	KRT18	P05783	430 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	ACO1	P21399	889 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	DDIT3	P35638	169 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	IL12RB1	P42701	662 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	DGKG	P49619	791 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	AFF3	P51826	1226 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	CASP5	P51878	434 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	HMGN5	P82970	282 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	GRIN1	Q05586	938 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	SUZ12	Q15022	739 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	TPGS1	Q6ZTW0	290 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	HS2ST1	Q7LGA3	356 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	TMPRSS6	Q8IU80	811 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	PDZD8	Q8NEN9	1154 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	KCNK16	Q96T55	309 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	FGFBP2	Q9BYJ0	223 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	ELOVL4	Q9GZR5	314 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	DNMT3L	Q9UJW3	386 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935	ANKRD6	Q9Y2G4	727 aa		11.7	□□□□□ -0.54
NUP62-222	ENST00000600935		H0Y8X5	98 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	PYCARD-AS1	I3L0S3	204 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	CBX4	O00257	560 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TULP1	O00294	542 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	PAPSS1	O43252	624 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TACC1	O75410	805 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	RTN3	O95197	1032 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TBX18	O95935	607 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TMEM191B	P0C7N4	346 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	PTPN1	P18031	435 aa	Known RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	GART	P22102	1010 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	OXTR	P30559	389 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	GNL1	P36915	607 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	SLC5A3	P53794	718 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TLE3	Q04726	772 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	RTP5	Q14D33	572 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	L1TD1	Q5T7N2	865 aa	Known RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	LRRC69	Q6ZNQ3	347 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	PAQR9	Q6ZVX9	377 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	GPR155	Q7Z3F1	870 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	IGSF8	Q969P0	613 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	SIPA1	Q96FS4	1042 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	AK8	Q96MA6	479 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	XPO6	Q96QU8	1125 aa	Known RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	ORAI3	Q9BRQ5	295 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	KLF16	Q9BXK1	252 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	SEMA4C	Q9C0C4	833 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	TM9SF3	Q9HD45	589 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	WDR35	Q9P2L0	1181 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	LIMCH1	Q9UPQ0	1083 aa		11.69	□□□□□ -0.54
NUP62-222	ENST00000600935	PLXNA2	O75051	1894 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	CAPN9	O14815	690 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	LDHA	P00338	332 aa	Known RBP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	C7	P10643	843 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	CTSK	P43235	329 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	GRIA4	P48058	902 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	CCT8	P50990	548 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	IL9R	Q01113	521 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	STARD3	Q14849	445 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	SF3A1	Q15459	793 aa	Known RBP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	GEN1	Q17RS7	908 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	RILPL1	Q5EBL4	403 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	C6orf118	Q5T5N4	469 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	CACUL1	Q86Y37	369 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	LURAP1L	Q8IV03	231 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	FAM184A	Q8NB25	1140 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	LARP4B	Q92615	738 aa	Known RBP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	BHMT	Q93088	406 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	CALML4	Q96GE6	196 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	ANKRD36BP1	Q96IX9	119 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	MMS19	Q96T76	1030 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	NUP58	Q9BVL2	599 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	PCED1A	Q9H1Q7	454 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	PCIF1	Q9H4Z3	704 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	OSGEP	Q9NPF4	335 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	PLK2	Q9NYY3	685 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	FTSJ1	Q9UET6	329 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	SLC27A6	Q9Y2P4	619 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	PCDHGA1	Q9Y5H4	931 aa		11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.68	□□□□□ -0.54
NUP62-222	ENST00000600935	ERVH48-1	M5A8F1	160 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	RRP8	O43159	456 aa	Known RBP	11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ARHGAP6	O43182	974 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	TLR5	O60602	858 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	CST3	P01034	146 aa	Predicted RBP	11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	JUP	P14923	745 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	PRKCH	P24723	683 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ACSL1	P33121	698 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	UBA7	P41226	1012 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ZNF132	P52740	706 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms