RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 EMILIN2Q9BXX0 1053 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 FAM204AQ9H8W3 233 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 RC3H2Q9HBD1 1191 aaKnown RBP13.3□□□□□ -0.28
ZNF548-210ENST00000600442 OLA1Q9NTK5 396 aaKnown RBP13.3□□□□□ -0.28
ZNF548-210ENST00000600442 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 SCML2Q9UQR0 700 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 USP3Q9Y6I4 520 aa13.3□□□□□ -0.28
ZNF548-210ENST00000600442 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 MTMR11A4FU01 709 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ZNF487B1APH4 448 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 M0QYT0 321 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 C2CD2LO14523 706 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 PRRG1O14668 218 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 FSCN2O14926 492 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 MDM4O15151 490 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 FGF18O76093 207 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 OR4Q2P0C623 313 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 SLC2A3P11169 496 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RALAP11233 206 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 YWHAQP27348 245 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 CA8P35219 290 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 FNTAP49354 379 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 NDUFV1P49821 464 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 TAS2R40P59535 323 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 YWHAGP61981 247 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ZNF252P-AS1Q0IIN9 211 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 TAF5Q15542 800 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ERMARDQ5T6L9 678 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ACBD5Q5T8D3 534 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 BSPRYQ5W0U4 402 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 CMASQ8NFW8 434 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 SLC7A14Q8TBB6 771 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 HSPH1Q92598 858 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 CLP1Q92989 425 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RNF34Q969K3 372 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 MAGOHBQ96A72 148 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 KRT12Q99456 494 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 AP1M1Q9BXS5 423 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 CALN1Q9BXU9 219 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 FNIP2Q9P278 1114 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 LZTS1Q9Y250 596 aa13.29□□□□□ -0.28
ZNF548-210ENST00000600442 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
ZNF548-210ENST00000600442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 NDC80O14777 642 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 PHF2O75151 1096 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 EFEMP2O95967 443 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 GAS8O95995 478 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 RHOXF2BP0C7M4 288 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 ARL4AP40617 200 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 PPP3CCP48454 512 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 MARCKSL1P49006 195 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 ERVK-21P61565 698 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 SLC25A11Q02978 314 aaKnown RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 UBE3AQ05086 875 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 DUSP4Q13115 394 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 NME3Q13232 169 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 RAB33AQ14088 237 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 BRD3Q15059 726 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 ELF2Q15723 593 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 CCDC142Q17RM4 750 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 PRSS55Q6UWB4 352 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 SPOCD1Q6ZMY3 1216 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 SYDE1Q6ZW31 735 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 BZW1Q7L1Q6 419 aaKnown RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 TAS1R1Q7RTX1 841 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 TMEM173Q86WV6 379 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 KLHL7Q8IXQ5 586 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 STKLD1Q8NE28 680 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 BCL7CQ8WUZ0 217 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 PGAP3Q96FM1 320 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 B3GALT6Q96L58 329 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 TGS1Q96RS0 853 aaKnown RBP13.28□□□□□ -0.28
ZNF548-210ENST00000600442 NPY6RQ99463 290 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
ZNF548-210ENST00000600442 RHOXF2Q9BQY4 288 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms