RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SLC7A9P82251 487 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 OGDHQ02218 1023 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 EIF4EBP2Q13542 120 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 SMAD2Q15796 467 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 DCAF6Q58WW2 860 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 BNIPLQ7Z465 357 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 TADA2BQ86TJ2 420 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 CMTM8Q8IZV2 173 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 FNIP1Q8TF40 1166 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 RFFLQ8WZ73 363 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 MYADMQ96S97 322 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 NPY6RQ99463 290 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 LACRTQ9GZZ8 138 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 NUDT5Q9UKK9 219 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 USTQ9Y2C2 406 aa13.22□□□□□ -0.29
CHMP2A-206ENST00000600118 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 A0A0U1RQJ8 604 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 CAPN9O14815 690 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 MDM4O15151 490 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 HDCP19113 662 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 PTPN9P43378 593 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF143P52747 638 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 PITX1P78337 314 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 TFF2Q03403 129 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 C10orf120Q5SQS8 335 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF662Q6ZS27 426 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 RNF139Q8WU17 664 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 CENPIQ92674 756 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 TRIM7Q9C029 511 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 RRN3Q9NYV6 651 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 MYH10P35580 1976 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
CHMP2A-206ENST00000600118 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ENDOD1O94919 500 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 CCDC175P0C221 793 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 LAMP2P13473 410 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 PDGFRAP16234 1089 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 TFE3P19532 575 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 GPD1P21695 349 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 SDC4P31431 198 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ZXDBP98169 803 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 NNTQ13423 1086 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 SLC25A52Q3SY17 297 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 FAM78AQ5JUQ0 283 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 TAC4Q86UU9 113 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ZNF564Q8TBZ8 553 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 USP13Q92995 863 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 PGAP3Q96FM1 320 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ASB16Q96NS5 453 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 KLF16Q9BXK1 252 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 STAP1Q9ULZ2 295 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
CHMP2A-206ENST00000600118 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms