RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ITPKAP23677 461 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 MAPK8P45983 427 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 GSDMDP57764 484 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 SNRPFP62306 86 aaKnown RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 FKBP3Q00688 224 aaKnown RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 ORC1Q13415 861 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 KCNJ12Q14500 433 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 PSMD6Q15008 389 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 SURF1Q15526 300 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 HSP90AA4PQ58FG1 418 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 DAB2IPQ5VWQ8 1189 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 UNQ6494/PRO21346Q6UXR6 183 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 IRF2BP1Q8IU81 584 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 BBS7Q8IWZ6 715 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 C12orf56Q8IXR9 622 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 B3GALNT2Q8NCR0 500 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 CEP63Q96MT8 703 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 CGRRF1Q99675 332 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 SRRTQ9BXP5 876 aaKnown RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 CGNQ9P2M7 1197 aaKnown RBP14.49□□□□□ -0.09
IRF3-225ENST00000600022 ZMIZ1Q9ULJ6 1067 aa14.49□□□□□ -0.09
IRF3-225ENST00000600022 TCRBV21S2A2A0A5A6 115 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 MAP3K13O43283 966 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 GNA14O95837 355 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 TBX18O95935 607 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 NR3C1P04150 777 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 APODP05090 189 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 ADH5P11766 374 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 HOXB3P14651 431 aaPredicted RBP14.48□□□□□ -0.09
IRF3-225ENST00000600022 PFKLP17858 780 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 YWHAQP27348 245 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 GRIA2P42262 883 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 PDE6CP51160 858 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 TRIM61Q5EBN2 209 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 TCP11X2Q5H9J9 407 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 KIAA1211LQ6NV74 962 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 ETFBKMTQ8IXQ9 262 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 ZMIZ2Q8NF64 920 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 OR2I1PQ8NGU4 316 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 FBXO32Q969P5 355 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 P2RY11Q96G91 374 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 CEP295NLQ96MC4 621 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 ACOX2Q99424 681 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 SCNM1Q9BWG6 230 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 KIAA1586Q9HCI6 787 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 CD93Q9NPY3 652 aa14.48□□□□□ -0.09
IRF3-225ENST00000600022 LIMA1Q9UHB6 759 aaKnown RBP14.48□□□□□ -0.09
IRF3-225ENST00000600022 MYO18AQ92614 2054 aaKnown RBP14.48□□□□□ -0.09
IRF3-225ENST00000600022 SPAARA0A1B0GVQ0 90 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 PES1O00541 588 aaKnown RBP14.47□□□□□ -0.09
IRF3-225ENST00000600022 TULP3O75386 442 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 VNN1O95497 513 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 TPM1P09493 284 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 IRF1P10914 325 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 CEACAM1P13688 526 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 ENGP17813 658 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 NR2F2P24468 414 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
IRF3-225ENST00000600022 RPL13P26373 211 aaKnown RBP14.47□□□□□ -0.09
IRF3-225ENST00000600022 TNFRSF4P43489 277 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 MTIF2P46199 727 aaKnown RBP14.47□□□□□ -0.09
IRF3-225ENST00000600022 PPP3CCP48454 512 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 TNNC1P63316 161 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 FAM193AP78312 1265 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 SCARA5Q6ZMJ2 495 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 LPCAT2Q7L5N7 544 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 APTXQ7Z2E3 356 aaKnown RBP14.47□□□□□ -0.09
IRF3-225ENST00000600022 TMC6Q7Z403 805 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 SLC9A9Q8IVB4 645 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 PGBD3Q8N328 593 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 XXYLT1Q8NBI6 393 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 SLITRK1Q96PX8 696 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 ELOVL4Q9GZR5 314 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 SLC6A17Q9H1V8 727 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 IL37Q9NZH6 218 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 GMIPQ9P107 970 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 BCCIPQ9P287 314 aaKnown RBP eCLIP14.47□□□□□ -0.09
IRF3-225ENST00000600022 HMGXB4Q9UGU5 601 aa14.47□□□□□ -0.09
IRF3-225ENST00000600022 LAMA5O15230 3695 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 E2F8A0AVK6 867 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 TBC1D3BA6NDS4 549 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 SLC9A3R1O14745 358 aaPredicted RBP14.46□□□□□ -0.09
IRF3-225ENST00000600022 CETN3O15182 167 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 SLC16A3O15427 465 aaKnown RBP14.46□□□□□ -0.09
IRF3-225ENST00000600022 GREM1O60565 184 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 ALDH1A2O94788 518 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 ADH1CP00326 375 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 CCDC130P13994 396 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 GABRG2P18507 467 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 CSRP1P21291 193 aaKnown RBP14.46□□□□□ -0.09
IRF3-225ENST00000600022 SLC5A3P53794 718 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 MARSP56192 900 aaKnown RBP14.46□□□□□ -0.09
IRF3-225ENST00000600022 DLG4P78352 724 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 TRPC3Q13507 836 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 HECTD3Q5T447 861 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 FAM35AQ86V20 835 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 SYT12Q8IV01 421 aa14.46□□□□□ -0.09
IRF3-225ENST00000600022 FUKQ8N0W3 1084 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms