RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 USP4Q13107 963 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 ZNF77Q15935 545 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 VITQ6UXI7 678 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 MMS22LQ6ZRQ5 1243 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 MCOLN2Q8IZK6 566 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 SH3RF2Q8TEC5 729 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 CLEC4CQ8WTT0 213 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 ZFRQ96KR1 1074 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 CCDC42Q96M95 316 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 SERPINB11Q96P15 392 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 KLF16Q9BXK1 252 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 SMOC2Q9H3U7 446 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 DEF6Q9H4E7 631 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 SLC2A4RGQ9NR83 387 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 TBC1D14Q9P2M4 693 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 LSM7Q9UK45 103 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 STAP1Q9ULZ2 295 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 ZNF510Q9Y2H8 683 aa17.31■□□□□ 0.36
SHKBP1-219ENST00000599575 TTC28Q96AY4 2481 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 MYH10P35580 1976 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 LEFTY2O00292 366 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 DAB1O75553 588 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 FTLP02792 175 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 FYNP06241 537 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 ALADP13716 330 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 MATKP42679 507 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 MLLT6P55198 1093 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 GSDMDP57764 484 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 MTF1Q14872 753 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 PDGFRLQ15198 375 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 HTR3DQ70Z44 454 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 CCDC170Q8IYT3 715 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 NDRG1Q92597 394 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 DNASE1L2Q92874 299 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 PLD4Q96BZ4 506 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 KXD1Q9BQD3 176 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 C11orf70Q9BRQ4 267 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 TJP2Q9UDY2 1190 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 DUSP12Q9UNI6 340 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 CCL26Q9Y258 94 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
SHKBP1-219ENST00000599575 VCANP13611 3396 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 ANKRD62A6NC57 917 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 ZNF263O14978 683 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 AKR1B10O60218 316 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 LATS1O95835 1130 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 TBX18O95935 607 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 F9P00740 461 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 SLC2A3P11169 496 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 FECHP22830 423 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 GBP1P32455 592 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 EIF4A3P38919 411 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 ASTE1Q2TB18 679 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 C10orf76Q5T2E6 689 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 NUGGCQ68CJ6 796 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 ALKBH5Q6P6C2 394 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 HFE2Q6ZVN8 426 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 TMTC1Q8IUR5 882 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 UNC45BQ8IWX7 931 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 EDEM1Q92611 657 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 NT5C3BQ969T7 300 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 PGAP3Q96FM1 320 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 NHEJ1Q9H9Q4 299 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 PARVAQ9NVD7 372 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 TLR6Q9Y2C9 796 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 SH3BP1Q9Y3L3 701 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 PAXBP1Q9Y5B6 917 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 SCINQ9Y6U3 715 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 ZNF638Q14966 1978 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 NCOR1O75376 2440 aa17.29■□□□□ 0.36
SHKBP1-219ENST00000599575 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 A0A087X0T9 212 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 ASGR2P07307 311 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 FAM228BP0C875 321 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 KRT3P12035 628 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 GLULP15104 373 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 DESP17661 470 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 TRIP4Q15650 581 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 DCAF6Q58WW2 860 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 ACBD5Q5T8D3 534 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 MIB1Q86YT6 1006 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 DQX1Q8TE96 717 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 OSCP1Q8WVF1 389 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 RSAD2Q8WXG1 361 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 AZIN2Q96A70 460 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 RSPRY1Q96DX4 576 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms