RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 ISLR2Q6UXK2 745 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 SLC26A11Q86WA9 606 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-208ENST00000599343 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 EPS8L2Q9H6S3 715 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
SCN8A-208ENST00000599343 AP4E1Q9UPM8 1137 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
SCN8A-208ENST00000599343 UBE2Q2LH0YL09 131 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 SLC2A3P11169 496 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 NR6A1Q15406 480 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 TIGD7Q6NT04 549 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-208ENST00000599343 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 TMEM237Q96Q45 408 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 PIH1D1Q9NWS0 290 aaKnown RBP12.17□□□□□ -0.46
SCN8A-208ENST00000599343 KLHL3Q9UH77 587 aa12.17□□□□□ -0.46
SCN8A-208ENST00000599343 CCNT2O60583 730 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 JCHAINP01591 159 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 FGFR2P21802 821 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 SLC1A6P48664 564 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 EIF2B2P49770 351 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ZNF157P51786 506 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PKN2Q16513 984 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ZNF57Q68EA5 555 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 VPS33AQ96AX1 596 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 TPD52L3Q96J77 140 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PARK7Q99497 189 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ATG7O95352 703 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 RRM1P23921 792 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 EFEMP1Q12805 493 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 C1DQ13901 141 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 STARD3Q14849 445 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 TRIQKQ629K1 86 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 FAM45BPQ6NSW5 357 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 CBWD1Q9BRT8 395 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 NOL6Q9H6R4 1146 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 AFF2P51816 1311 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 C17orf102A2RUQ5 167 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 CYB561D2O14569 222 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 GLP2RO95838 553 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 BCL10O95999 233 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 VDRP11473 427 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 MPP3Q13368 585 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 DDR2Q16832 855 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 CCNJLQ8IV13 435 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PHACTR4Q8IZ21 702 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 FHDC1Q9C0D6 1143 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 PLAGL2Q9UPG8 496 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ACOT9Q9Y305 439 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 THPOP40225 353 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 YWHAZP63104 245 aaKnown RBP12.16□□□□□ -0.46
SCN8A-208ENST00000599343 WDR93Q6P2C0 686 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 MED8Q96G25 268 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 ELOVL6Q9H5J4 265 aa12.16□□□□□ -0.46
SCN8A-208ENST00000599343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCN8A-208ENST00000599343 TMEM191CA6NGB0 347 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 KRT20P35900 424 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 PDZK1Q5T2W1 519 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 N4BP2L1Q5TBK1 243 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-208ENST00000599343 SNX30Q5VWJ9 437 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
SCN8A-208ENST00000599343 DDX20Q9UHI6 824 aaKnown RBP12.15□□□□□ -0.46
SCN8A-208ENST00000599343 FKBP6O75344 327 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 ENTPD3O75355 529 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 VTNP04004 478 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 NFICP08651 508 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 RBP1P09455 135 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 TPH1P17752 444 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 ITGALP20701 1170 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 PCNX4Q63HM2 1172 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 RNF148Q8N7C7 305 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 UBASH3BQ8TF42 649 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 ELMO3Q96BJ8 720 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 NAALADL1Q9UQQ1 740 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 TM9SF1O15321 606 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 IFNA14P01570 189 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 RAG1P15918 1043 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 MUTP22033 750 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 FASP25445 335 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 YWHAQP27348 245 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 KCTD21Q4G0X4 260 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 KLHL17Q6TDP4 642 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 ACTRT1Q8TDG2 376 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 SEMA6BQ9H3T3 888 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
SCN8A-208ENST00000599343 NCKIPSDQ9NZQ3 722 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms